Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC062029.1-202ENST00000606164 3651 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RNA5SP478-201ENST00000364657 115 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 SNORD116.1-201ENST00000365628 92 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RN7SKP221-201ENST00000410420 301 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 MTND4P22-201ENST00000413116 1169 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 LINC01347-201ENST00000417964 355 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RPF2P1-201ENST00000424137 906 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RAC1P8-201ENST00000427086 527 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 MTND1P20-201ENST00000430341 950 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 AL445567.1-201ENST00000439121 144 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 ARL4AP3-201ENST00000441452 574 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC015983.1-201ENST00000441577 373 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 COL11A2P1-205ENST00000441798 676 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC073648.4-201ENST00000442655 781 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AL592437.1-201ENST00000443781 492 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AL020997.1-201ENST00000446554 349 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 PPIAP32-201ENST00000449940 472 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.72□□□□□ -1.49
CLRN1P58418 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 H3F3AP5-201ENST00000475267 429 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 RPS3AP43-201ENST00000479743 781 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 RN7SL502P-201ENST00000481857 290 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC069528.1-202ENST00000482888 637 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.72□□□□□ -1.49
CLRN1P58418 RPL17P2-201ENST00000491913 451 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 RPF2P2-201ENST00000504693 896 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 HPRT1P2-201ENST00000505250 544 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC008565.1-201ENST00000509046 885 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC108120.2-201ENST00000512973 294 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 HMGB1P1-201ENST00000522557 636 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC073916.1-201ENST00000545095 130 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.72□□□□□ -1.49
CLRN1P58418 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC090888.1-201ENST00000561335 1141 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC090616.1-201ENST00000583895 447 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 OR2BH1P-201ENST00000608850 864 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 AC004836.1-201ENST00000623032 634 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC010435.1-201ENST00000623353 1177 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC007490.1-201ENST00000624321 703 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AC068213.1-201ENST00000625124 226 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 AL596275.2-208ENST00000641192 594 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 AC125238.2-201ENST00000430003 1440 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
CLRN1P58418 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLRN1P58418 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.71□□□□□ -1.49
CLRN1P58418 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.71□□□□□ -1.49
CLRN1P58418 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLRN1P58418 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
CLRN1P58418 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.71□□□□□ -1.5
CLRN1P58418 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLRN1P58418 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLRN1P58418 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLRN1P58418 FAM133CP-201ENST00000332869 704 ntBASIC5.71□□□□□ -1.5
CLRN1P58418 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLRN1P58418 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms