Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NPIPB1P-202ENST00000588786 828 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.73□□□□□ -1.49
NR1H2P55055 AL589863.1-201ENST00000595383 631 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC079315.1-201ENST00000602952 623 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC004805.3-201ENST00000603178 310 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AL008723.3-201ENST00000608926 449 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.73□□□□□ -1.49
NR1H2P55055 SAMMSON-209ENST00000641222 1100 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 AP001541.1-201ENST00000623322 1904 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.73□□□□□ -1.49
NR1H2P55055 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NR1H2P55055 AC010266.2-201ENST00000564741 3255 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AP001029.2-203ENST00000589795 4910 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 AC117409.1-201ENST00000470499 1310 ntBASIC5.73□□□□□ -1.49
NR1H2P55055 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 TCP1P3-201ENST00000414406 1498 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NR1H2P55055 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NR1H2P55055 RNA5SP77-201ENST00000365394 120 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 RNU1-84P-201ENST00000365447 164 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 RNU4-74P-201ENST00000411280 161 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 OR51A6P-201ENST00000418680 1004 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 MORF4L1P7-201ENST00000426038 703 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 PSMC1P13-201ENST00000458195 985 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 RN7SL39P-201ENST00000462264 297 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 H3F3AP5-201ENST00000475267 429 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AP002884.1-201ENST00000479691 655 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC131392.1-201ENST00000506490 633 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC018797.1-201ENST00000510791 255 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 RNU6-1308P-201ENST00000516817 103 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 OR4A17P-201ENST00000526032 904 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC023968.1-201ENST00000560719 475 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC009962.1-201ENST00000567327 3813 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 RN7SL208P-201ENST00000577964 296 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC026898.1-201ENST00000586404 571 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC073137.1-201ENST00000605636 634 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC025175.1-201ENST00000606482 759 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 SNORD96A-201ENST00000606577 79 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 MIR6811-201ENST00000620409 58 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AL122023.1-201ENST00000622847 530 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AP006248.3-201ENST00000623580 594 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AC138965.3-201ENST00000623875 498 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.72□□□□□ -1.49
NR1H2P55055 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 MAPK10-328ENST00000641553 4009 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
NR1H2P55055 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.72□□□□□ -1.49
NR1H2P55055 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.72□□□□□ -1.49
NR1H2P55055 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.72□□□□□ -1.49
NR1H2P55055 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NR1H2P55055 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NR1H2P55055 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
NR1H2P55055 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NR1H2P55055 PARP4P2-201ENST00000446672 3326 ntBASIC5.71□□□□□ -1.49
NR1H2P55055 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NR1H2P55055 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.71□□□□□ -1.49
NR1H2P55055 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms