Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC109780.1-201ENST00000451768 1344 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AC092451.3-201ENST00000625067 1343 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 MTND5P23-201ENST00000430812 1655 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 SNORA64.1-201ENST00000362600 132 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ATXN3P54252 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC098592.2-201ENST00000413158 265 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 OR6E1P-201ENST00000414424 923 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 RPL12P43-201ENST00000420608 499 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AL445928.1-201ENST00000435545 222 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.83□□□□□ -1.48
ATXN3P54252 SNORA26.10-201ENST00000516427 141 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.83□□□□□ -1.48
ATXN3P54252 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.83□□□□□ -1.48
ATXN3P54252 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 MIR6837-201ENST00000620884 64 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 AL390318.1-201ENST00000624564 687 ntBASIC5.83□□□□□ -1.48
ATXN3P54252 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.83□□□□□ -1.48
ATXN3P54252 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.83□□□□□ -1.48
ATXN3P54252 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATXN3P54252 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATXN3P54252 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
ATXN3P54252 RNA5SP500-201ENST00000364486 119 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 RMRPP5-201ENST00000411156 267 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 DPPA2P3-201ENST00000411853 655 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.82□□□□□ -1.48
ATXN3P54252 AL022331.1-201ENST00000429025 477 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.82□□□□□ -1.48
ATXN3P54252 SNRPFP2-201ENST00000440710 251 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.82□□□□□ -1.48
ATXN3P54252 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.82□□□□□ -1.48
ATXN3P54252 RAB28P2-201ENST00000454299 641 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 AC104164.1-201ENST00000460282 590 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 RN7SL352P-201ENST00000466002 277 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 TOMM22P4-201ENST00000511318 336 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 CYP4F27P-201ENST00000514557 494 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 TPM3P3-201ENST00000521343 354 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.82□□□□□ -1.48
ATXN3P54252 HMGB1P42-201ENST00000532126 553 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.82□□□□□ -1.48
ATXN3P54252 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.82□□□□□ -1.48
ATXN3P54252 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 BCORP1-203ENST00000513194 5093 ntBASIC5.82□□□□□ -1.48
ATXN3P54252 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATXN3P54252 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
ATXN3P54252 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
ATXN3P54252 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.81□□□□□ -1.48
ATXN3P54252 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATXN3P54252 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.81□□□□□ -1.48
ATXN3P54252 AC020633.1-201ENST00000468439 2247 ntBASIC5.81□□□□□ -1.48
ATXN3P54252 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATXN3P54252 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 AL391422.1-201ENST00000402155 436 ntBASIC5.81□□□□□ -1.48
ATXN3P54252 MRPL53P1-201ENST00000414323 319 ntBASIC5.81□□□□□ -1.48
ATXN3P54252 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 VN1R31P-201ENST00000417498 730 ntBASIC5.81□□□□□ -1.48
ATXN3P54252 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.81□□□□□ -1.48
ATXN3P54252 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.81□□□□□ -1.48
ATXN3P54252 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms