Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PGAM1P13-201ENST00000507497 754 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.11□□□□□ -1.43
CLCN3P51790 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.11□□□□□ -1.43
CLCN3P51790 RN7SKP253-201ENST00000516424 309 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 RNA5SP92-201ENST00000516437 110 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 SNORA70.17-201ENST00000516449 133 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.11□□□□□ -1.43
CLCN3P51790 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.11□□□□□ -1.43
CLCN3P51790 PMS2P3-207ENST00000529061 717 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 OR4A6P-201ENST00000534364 970 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.11□□□□□ -1.43
CLCN3P51790 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.11□□□□□ -1.43
CLCN3P51790 AC126177.5-201ENST00000549599 178 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.11□□□□□ -1.43
CLCN3P51790 BLZF2P-201ENST00000553776 1130 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 NPM1P42-201ENST00000560329 862 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 GMCL1P2-201ENST00000605230 823 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AL512329.2-201ENST00000607350 548 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 AC006213.5-201ENST00000619673 288 ntBASIC6.11□□□□□ -1.43
CLCN3P51790 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLCN3P51790 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLCN3P51790 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLCN3P51790 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLCN3P51790 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.11□□□□□ -1.43
CLCN3P51790 CDY11P-201ENST00000447168 1651 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 AL592429.1-201ENST00000403909 1473 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 AL589826.1-201ENST00000340697 249 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 MIR133B-201ENST00000362210 119 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 RNA5SP183-201ENST00000362452 119 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 RNU6-819P-201ENST00000364116 107 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 RNU1-136P-201ENST00000384181 164 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 RN7SKP279-201ENST00000411383 298 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AC007161.1-204ENST00000423039 460 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 BRWD1P3-201ENST00000428816 390 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.1□□□□□ -1.43
CLCN3P51790 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 OR52A4P-202ENST00000481634 799 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.1□□□□□ -1.43
CLCN3P51790 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.1□□□□□ -1.43
CLCN3P51790 HIGD1AP14-201ENST00000507617 282 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 MTND2P31-201ENST00000512602 616 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 AC023389.2-201ENST00000580031 955 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.1□□□□□ -1.43
CLCN3P51790 VN1R81P-201ENST00000602085 372 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 AL118508.4-201ENST00000624142 1176 ntBASIC6.1□□□□□ -1.43
CLCN3P51790 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLCN3P51790 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CLCN3P51790 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.1□□□□□ -1.43
CLCN3P51790 DNM1P47-203ENST00000571780 12667 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN3P51790 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN3P51790 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.09□□□□□ -1.43
CLCN3P51790 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CLCN3P51790 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN3P51790 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN3P51790 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.09□□□□□ -1.43
CLCN3P51790 AL121886.1-201ENST00000358609 435 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CLCN3P51790 AL136116.2-201ENST00000404020 785 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.09□□□□□ -1.43
CLCN3P51790 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.09□□□□□ -1.43
CLCN3P51790 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.09□□□□□ -1.43
CLCN3P51790 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.09□□□□□ -1.43
CLCN3P51790 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.09□□□□□ -1.43
CLCN3P51790 AC105399.1-202ENST00000447303 205 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN3P51790 RN7SL727P-201ENST00000482164 296 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 RN7SL30P-201ENST00000488416 306 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.09□□□□□ -1.43
CLCN3P51790 SNRPGP1-201ENST00000553864 222 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.09□□□□□ -1.43
CLCN3P51790 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CLCN3P51790 RBM22P1-201ENST00000578589 1214 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 AP005403.1-201ENST00000579720 229 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CLCN3P51790 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.09□□□□□ -1.43
CLCN3P51790 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.09□□□□□ -1.43
CLCN3P51790 AC022387.2-201ENST00000604050 448 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms