Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.64□□□□□ -1.19
CPS1P31327 AC134349.2-201ENST00000535136 910 ntBASIC7.64□□□□□ -1.19
CPS1P31327 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.64□□□□□ -1.19
CPS1P31327 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.64□□□□□ -1.19
CPS1P31327 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CPS1P31327 CASC19-260ENST00000641828 2001 ntBASIC7.64□□□□□ -1.19
CPS1P31327 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CPS1P31327 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
CPS1P31327 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CPS1P31327 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CPS1P31327 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.63□□□□□ -1.19
CPS1P31327 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CPS1P31327 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 RNA5SP332-201ENST00000391063 115 ntBASIC7.63□□□□□ -1.19
CPS1P31327 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CPS1P31327 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.63□□□□□ -1.19
CPS1P31327 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC7.63□□□□□ -1.19
CPS1P31327 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.63□□□□□ -1.19
CPS1P31327 RN7SKP253-201ENST00000516424 309 ntBASIC7.63□□□□□ -1.19
CPS1P31327 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.63□□□□□ -1.19
CPS1P31327 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.63□□□□□ -1.19
CPS1P31327 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.63□□□□□ -1.19
CPS1P31327 RPL26P30-202ENST00000602923 645 ntBASIC7.63□□□□□ -1.19
CPS1P31327 AC009948.3-201ENST00000603415 1798 ntBASIC7.63□□□□□ -1.19
CPS1P31327 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.63□□□□□ -1.19
CPS1P31327 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 HSPD1P7-201ENST00000447985 1686 ntBASIC7.63□□□□□ -1.19
CPS1P31327 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CPS1P31327 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CPS1P31327 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.63□□□□□ -1.19
CPS1P31327 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CPS1P31327 FAM3C2-201ENST00000312214 681 ntBASIC7.62□□□□□ -1.19
CPS1P31327 RN7SKP227-201ENST00000364445 330 ntBASIC7.62□□□□□ -1.19
CPS1P31327 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.62□□□□□ -1.19
CPS1P31327 NDUFA5P8-201ENST00000449019 346 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.62□□□□□ -1.19
CPS1P31327 ATP5LP5-201ENST00000483050 299 ntBASIC7.62□□□□□ -1.19
CPS1P31327 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.62□□□□□ -1.19
CPS1P31327 BTF3P13-201ENST00000513224 490 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.62□□□□□ -1.19
CPS1P31327 AC233699.1-201ENST00000569955 1168 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AC091042.1-201ENST00000579213 173 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AL590392.1-201ENST00000604960 446 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AC092653.1-201ENST00000608509 531 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AC135068.12-201ENST00000637370 931 ntBASIC7.62□□□□□ -1.19
CPS1P31327 HSPD1P8-201ENST00000400121 1658 ntBASIC7.62□□□□□ -1.19
CPS1P31327 BRD7P6-201ENST00000431406 1860 ntBASIC7.62□□□□□ -1.19
CPS1P31327 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 AC007996.1-201ENST00000620414 2821 ntBASIC7.62□□□□□ -1.19
CPS1P31327 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CPS1P31327 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 AL121977.1-201ENST00000401636 979 ntBASIC7.62□□□□□ -1.19
CPS1P31327 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.62□□□□□ -1.19
CPS1P31327 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.62□□□□□ -1.19
CPS1P31327 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.62□□□□□ -1.19
CPS1P31327 BGLT3-201ENST00000564523 994 ntBASIC7.62□□□□□ -1.19
CPS1P31327 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 AC009597.2-201ENST00000604659 592 ntBASIC7.62□□□□□ -1.19
CPS1P31327 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.62□□□□□ -1.19
CPS1P31327 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CPS1P31327 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.61□□□□□ -1.19
CPS1P31327 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
CPS1P31327 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.61□□□□□ -1.19
CPS1P31327 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CPS1P31327 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CPS1P31327 RNA5SP388-201ENST00000362584 119 ntBASIC7.61□□□□□ -1.19
CPS1P31327 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CPS1P31327 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.61□□□□□ -1.19
CPS1P31327 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.61□□□□□ -1.19
CPS1P31327 AP000769.2-201ENST00000602344 396 ntBASIC7.61□□□□□ -1.19
CPS1P31327 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CPS1P31327 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CPS1P31327 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms