Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNORA43.3-201ENST00000517240 103 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC020978.7-201ENST00000575953 1187 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 MIR4311-201ENST00000580794 100 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC009303.3-201ENST00000591103 736 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 RNA5SP440-201ENST00000612665 119 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PDGFRAP16234 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFRAP16234 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFRAP16234 OR4F13P-202ENST00000560066 2054 ntBASIC5.9□□□□□ -1.47
PDGFRAP16234 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
PDGFRAP16234 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.47
PDGFRAP16234 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PDGFRAP16234 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFRAP16234 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFRAP16234 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFRAP16234 SRRM1P3-201ENST00000426911 2678 ntBASIC5.9□□□□□ -1.47
PDGFRAP16234 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PDGFRAP16234 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AC018809.2-201ENST00000602436 3823 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 GAPDHP24-201ENST00000328713 983 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 RNA5SP242-201ENST00000364171 118 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 AL512422.1-201ENST00000407033 553 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 OR2AT2P-201ENST00000413438 905 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 SDHDP6-201ENST00000414693 480 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 VN1R31P-201ENST00000417498 730 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 CHEK2P5-201ENST00000423877 246 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 HMGB1P32-201ENST00000425971 565 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 NANOGP9-201ENST00000439890 892 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 AP000281.1-201ENST00000444036 316 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 EEF1B2P6-201ENST00000445713 673 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 RPS23P9-201ENST00000448848 438 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 LRRC37A14P-201ENST00000452297 462 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 RNU6-775P-201ENST00000459318 96 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AC111000.6-201ENST00000514471 709 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 RN7SKP253-201ENST00000516424 309 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 NPM1P52-201ENST00000518264 846 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 OR8Q1P-201ENST00000526467 655 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 PMS2P3-207ENST00000529061 717 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 IGBP1P1-201ENST00000554337 1009 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AC011445.2-201ENST00000599274 173 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PDGFRAP16234 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 AL592429.1-201ENST00000403909 1473 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFRAP16234 LINC02019-201ENST00000608605 2060 ntBASIC5.89□□□□□ -1.47
PDGFRAP16234 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFRAP16234 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFRAP16234 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDGFRAP16234 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFRAP16234 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFRAP16234 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFRAP16234 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDGFRAP16234 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDGFRAP16234 MIR323A-201ENST00000362199 86 ntBASIC5.88□□□□□ -1.47
PDGFRAP16234 RNA5SP131-201ENST00000365452 119 ntBASIC5.88□□□□□ -1.47
PDGFRAP16234 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFRAP16234 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFRAP16234 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFRAP16234 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFRAP16234 RNU11-201ENST00000387069 134 ntBASIC5.88□□□□□ -1.47
PDGFRAP16234 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms