Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.03□□□□□ -0.96
CFTRP13569 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
CFTRP13569 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CFTRP13569 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
CFTRP13569 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC9.03□□□□□ -0.96
CFTRP13569 RN7SKP114-201ENST00000410327 279 ntBASIC9.02□□□□□ -0.96
CFTRP13569 AC004690.1-201ENST00000418216 328 ntBASIC9.02□□□□□ -0.96
CFTRP13569 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.02□□□□□ -0.96
CFTRP13569 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.02□□□□□ -0.96
CFTRP13569 RN7SL188P-201ENST00000469842 285 ntBASIC9.02□□□□□ -0.96
CFTRP13569 RPL7P40-201ENST00000481703 745 ntBASIC9.02□□□□□ -0.96
CFTRP13569 MRPS33P2-201ENST00000507850 322 ntBASIC9.02□□□□□ -0.96
CFTRP13569 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC9.02□□□□□ -0.96
CFTRP13569 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CFTRP13569 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC9.02□□□□□ -0.96
CFTRP13569 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CFTRP13569 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
CFTRP13569 AC073869.8-201ENST00000641806 335 ntBASIC9.02□□□□□ -0.96
CFTRP13569 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
CFTRP13569 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
CFTRP13569 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
CFTRP13569 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
CFTRP13569 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC9.02□□□□□ -0.97
CFTRP13569 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CFTRP13569 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CFTRP13569 AC123769.2-201ENST00000624332 5984 ntBASIC9.02□□□□□ -0.97
CFTRP13569 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CFTRP13569 AL449283.1-201ENST00000602631 3403 ntBASIC9.02□□□□□ -0.97
CFTRP13569 AC008171.1-201ENST00000395058 200 ntBASIC9.02□□□□□ -0.97
CFTRP13569 RSL24D1P6-201ENST00000426934 401 ntBASIC9.02□□□□□ -0.97
CFTRP13569 AL390879.1-201ENST00000439143 386 ntBASIC9.02□□□□□ -0.97
CFTRP13569 AL161747.1-201ENST00000480068 358 ntBASIC9.02□□□□□ -0.97
CFTRP13569 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.02□□□□□ -0.97
CFTRP13569 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC9.02□□□□□ -0.97
CFTRP13569 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.02□□□□□ -0.97
CFTRP13569 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC9.02□□□□□ -0.97
CFTRP13569 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
CFTRP13569 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC9.02□□□□□ -0.97
CFTRP13569 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CFTRP13569 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC9.02□□□□□ -0.97
CFTRP13569 ALB-220ENST00000621628 1606 ntTSL 5 BASIC9.01□□□□□ -0.97
CFTRP13569 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.01□□□□□ -0.97
CFTRP13569 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.01□□□□□ -0.97
CFTRP13569 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CFTRP13569 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 RNA5SP90-201ENST00000364801 99 ntBASIC9.01□□□□□ -0.97
CFTRP13569 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
CFTRP13569 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CFTRP13569 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC9.01□□□□□ -0.97
CFTRP13569 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC9.01□□□□□ -0.97
CFTRP13569 ATP6V0E1P2-201ENST00000441771 245 ntBASIC9.01□□□□□ -0.97
CFTRP13569 OR52J1P-201ENST00000450596 932 ntBASIC9.01□□□□□ -0.97
CFTRP13569 NUTF2P7-201ENST00000453086 375 ntBASIC9.01□□□□□ -0.97
CFTRP13569 AC006967.1-201ENST00000467608 589 ntBASIC9.01□□□□□ -0.97
CFTRP13569 AC011005.3-201ENST00000491624 395 ntBASIC9.01□□□□□ -0.97
CFTRP13569 RPL17P2-201ENST00000491913 451 ntBASIC9.01□□□□□ -0.97
CFTRP13569 AC012400.1-201ENST00000518452 381 ntBASIC9.01□□□□□ -0.97
CFTRP13569 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC9.01□□□□□ -0.97
CFTRP13569 MIR4284-201ENST00000578924 81 ntBASIC9.01□□□□□ -0.97
CFTRP13569 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.01□□□□□ -0.97
CFTRP13569 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CFTRP13569 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC9.01□□□□□ -0.97
CFTRP13569 TTC3P1-201ENST00000399586 6081 ntBASIC9.01□□□□□ -0.97
CFTRP13569 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9□□□□□ -0.97
CFTRP13569 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC9□□□□□ -0.97
CFTRP13569 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC9□□□□□ -0.97
CFTRP13569 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CFTRP13569 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC9□□□□□ -0.97
CFTRP13569 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 AC069213.2-201ENST00000420238 366 ntBASIC9□□□□□ -0.97
CFTRP13569 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC9□□□□□ -0.97
CFTRP13569 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC9□□□□□ -0.97
CFTRP13569 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC9□□□□□ -0.97
CFTRP13569 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC9□□□□□ -0.97
CFTRP13569 AC091912.1-201ENST00000511351 248 ntBASIC9□□□□□ -0.97
CFTRP13569 AP002981.1-201ENST00000517692 975 ntBASIC9□□□□□ -0.97
CFTRP13569 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC9□□□□□ -0.97
CFTRP13569 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC9□□□□□ -0.97
CFTRP13569 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9□□□□□ -0.97
CFTRP13569 AC011453.2-201ENST00000603737 729 ntBASIC9□□□□□ -0.97
CFTRP13569 AL034374.2-201ENST00000605281 548 ntBASIC9□□□□□ -0.97
CFTRP13569 AC135068.12-201ENST00000637370 931 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms