Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL133247.2-201ENST00000603236 482 ntBASIC5.68□□□□□ -1.5
PCNAP12004 MIR6780B-201ENST00000610307 79 ntBASIC5.68□□□□□ -1.5
PCNAP12004 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.68□□□□□ -1.5
PCNAP12004 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.68□□□□□ -1.5
PCNAP12004 AC104966.1-201ENST00000467010 1464 ntBASIC5.68□□□□□ -1.5
PCNAP12004 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 PARP4P2-201ENST00000446672 3326 ntBASIC5.68□□□□□ -1.5
PCNAP12004 AC011933.2-201ENST00000578539 2790 ntBASIC5.68□□□□□ -1.5
PCNAP12004 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCNAP12004 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
PCNAP12004 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCNAP12004 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.67□□□□□ -1.5
PCNAP12004 HSPD1P7-201ENST00000447985 1686 ntBASIC5.67□□□□□ -1.5
PCNAP12004 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCNAP12004 COX6B1P3-201ENST00000312310 260 ntBASIC5.67□□□□□ -1.5
PCNAP12004 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCNAP12004 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.67□□□□□ -1.5
PCNAP12004 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.67□□□□□ -1.5
PCNAP12004 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 AMYP1-201ENST00000440059 1023 ntBASIC5.67□□□□□ -1.5
PCNAP12004 Z99127.2-201ENST00000441426 334 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC023141.8-201ENST00000442554 208 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 BMS1P10-201ENST00000443754 1120 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 AC005077.1-201ENST00000449226 375 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 RNU1-88P-201ENST00000459274 128 ntBASIC5.67□□□□□ -1.5
PCNAP12004 EIF2S2P4-201ENST00000461070 984 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC068228.1-201ENST00000461723 211 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC023194.2-201ENST00000465398 406 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 AC106806.2-201ENST00000509365 500 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC108157.1-201ENST00000510511 539 ntBASIC5.67□□□□□ -1.5
PCNAP12004 IGKV3D-25-201ENST00000519599 235 ntBASIC5.67□□□□□ -1.5
PCNAP12004 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AP003396.4-201ENST00000527574 265 ntBASIC5.67□□□□□ -1.5
PCNAP12004 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.67□□□□□ -1.5
PCNAP12004 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.67□□□□□ -1.5
PCNAP12004 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.67□□□□□ -1.5
PCNAP12004 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.67□□□□□ -1.5
PCNAP12004 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 AC006363.1-201ENST00000603806 463 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC245014.3-201ENST00000618589 347 ntBASIC5.67□□□□□ -1.5
PCNAP12004 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 AL136228.1-201ENST00000622221 319 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC073592.6-201ENST00000624271 415 ntBASIC5.67□□□□□ -1.5
PCNAP12004 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCNAP12004 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.67□□□□□ -1.5
PCNAP12004 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.67□□□□□ -1.5
PCNAP12004 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCNAP12004 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.67□□□□□ -1.5
PCNAP12004 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.66□□□□□ -1.5
PCNAP12004 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 AP004607.3-201ENST00000530354 3915 ntBASIC5.66□□□□□ -1.5
PCNAP12004 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 AC112255.1-201ENST00000624070 2493 ntBASIC5.66□□□□□ -1.5
PCNAP12004 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 QRSL1P1-201ENST00000400977 1540 ntBASIC5.66□□□□□ -1.5
PCNAP12004 RNA5SP453-201ENST00000362503 119 ntBASIC5.66□□□□□ -1.5
PCNAP12004 RN7SKP128-201ENST00000364270 303 ntBASIC5.66□□□□□ -1.5
PCNAP12004 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.66□□□□□ -1.5
PCNAP12004 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCNAP12004 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCNAP12004 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms