Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TOP1P11387 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 AC068870.1-201ENST00000563737 2455 ntBASIC6.47□□□□□ -1.37
TOP1P11387 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 CFL1P1-202ENST00000432948 411 ntBASIC6.47□□□□□ -1.37
TOP1P11387 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 RPS17P5-201ENST00000498293 408 ntBASIC6.47□□□□□ -1.37
TOP1P11387 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 RN7SKP99-201ENST00000517028 307 ntBASIC6.47□□□□□ -1.37
TOP1P11387 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 AC027026.1-201ENST00000532323 742 ntBASIC6.47□□□□□ -1.37
TOP1P11387 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 AC078878.1-201ENST00000539832 958 ntBASIC6.47□□□□□ -1.37
TOP1P11387 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.47□□□□□ -1.37
TOP1P11387 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP1P11387 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP1P11387 MIR6826-201ENST00000617808 98 ntBASIC6.47□□□□□ -1.37
TOP1P11387 AC005840.5-201ENST00000619166 599 ntBASIC6.47□□□□□ -1.37
TOP1P11387 AP000550.3-201ENST00000637734 379 ntBASIC6.47□□□□□ -1.37
TOP1P11387 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TOP1P11387 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP1P11387 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 ADAM24P-201ENST00000398655 2101 ntBASIC6.47□□□□□ -1.37
TOP1P11387 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TOP1P11387 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.46□□□□□ -1.37
TOP1P11387 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.37
TOP1P11387 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TOP1P11387 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.46□□□□□ -1.37
TOP1P11387 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
TOP1P11387 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.46□□□□□ -1.37
TOP1P11387 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TOP1P11387 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TOP1P11387 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.46□□□□□ -1.37
TOP1P11387 CDY11P-201ENST00000447168 1651 ntBASIC6.46□□□□□ -1.37
TOP1P11387 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
TOP1P11387 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TOP1P11387 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TOP1P11387 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TOP1P11387 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TOP1P11387 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.46□□□□□ -1.38
TOP1P11387 AC009804.1-201ENST00000400949 179 ntBASIC6.46□□□□□ -1.38
TOP1P11387 RN7SKP59-201ENST00000410520 314 ntBASIC6.46□□□□□ -1.38
TOP1P11387 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.46□□□□□ -1.38
TOP1P11387 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 MRPS21P2-201ENST00000424704 264 ntBASIC6.46□□□□□ -1.38
TOP1P11387 MTND2P40-201ENST00000436718 841 ntBASIC6.46□□□□□ -1.38
TOP1P11387 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.46□□□□□ -1.38
TOP1P11387 AC011225.1-201ENST00000457751 369 ntBASIC6.46□□□□□ -1.38
TOP1P11387 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.46□□□□□ -1.38
TOP1P11387 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.46□□□□□ -1.38
TOP1P11387 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TOP1P11387 OR5AM1P-201ENST00000532136 1032 ntBASIC6.46□□□□□ -1.38
TOP1P11387 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.46□□□□□ -1.38
TOP1P11387 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.46□□□□□ -1.38
TOP1P11387 AC122688.1-201ENST00000541494 223 ntBASIC6.46□□□□□ -1.38
TOP1P11387 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms