Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.37□□□□□ -1.71
CD28P10747 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD28P10747 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.37□□□□□ -1.71
CD28P10747 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD28P10747 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD28P10747 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD28P10747 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD28P10747 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CD28P10747 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 MRRFP1-201ENST00000435941 1675 ntBASIC4.36□□□□□ -1.71
CD28P10747 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CD28P10747 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CD28P10747 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 SNORA58B-201ENST00000364259 136 ntBASIC4.36□□□□□ -1.71
CD28P10747 MIR223-201ENST00000385204 110 ntBASIC4.36□□□□□ -1.71
CD28P10747 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CD28P10747 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 AC017078.1-201ENST00000416146 368 ntBASIC4.36□□□□□ -1.71
CD28P10747 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.36□□□□□ -1.71
CD28P10747 RPL7P45-201ENST00000455851 743 ntBASIC4.36□□□□□ -1.71
CD28P10747 TRBV5-2-201ENST00000489095 273 ntBASIC4.36□□□□□ -1.71
CD28P10747 TOMM22P4-201ENST00000511318 336 ntBASIC4.36□□□□□ -1.71
CD28P10747 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 IGLV3-24-201ENST00000517477 197 ntBASIC4.36□□□□□ -1.71
CD28P10747 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.36□□□□□ -1.71
CD28P10747 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.36□□□□□ -1.71
CD28P10747 AC126615.2-201ENST00000553003 515 ntBASIC4.36□□□□□ -1.71
CD28P10747 NPM1P42-201ENST00000560329 862 ntBASIC4.36□□□□□ -1.71
CD28P10747 AGGF1P7-201ENST00000562369 913 ntBASIC4.36□□□□□ -1.71
CD28P10747 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.36□□□□□ -1.71
CD28P10747 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.36□□□□□ -1.71
CD28P10747 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 SAMMSON-227ENST00000642114 1199 ntBASIC4.36□□□□□ -1.71
CD28P10747 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 AC087516.1-201ENST00000561236 2428 ntBASIC4.36□□□□□ -1.71
CD28P10747 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.36□□□□□ -1.71
CD28P10747 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.36□□□□□ -1.71
CD28P10747 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 AC005261.2-201ENST00000593427 4258 ntBASIC4.36□□□□□ -1.71
CD28P10747 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD28P10747 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CD28P10747 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AL138820.1-201ENST00000617901 5305 ntBASIC4.35□□□□□ -1.71
CD28P10747 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CD28P10747 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 RN7SKP6-201ENST00000364795 319 ntBASIC4.35□□□□□ -1.71
CD28P10747 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CD28P10747 TRAV35-201ENST00000390462 330 ntBASIC4.35□□□□□ -1.71
CD28P10747 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.35□□□□□ -1.71
CD28P10747 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AL139148.1-201ENST00000427122 680 ntBASIC4.35□□□□□ -1.71
CD28P10747 NANOGP4-201ENST00000427230 913 ntBASIC4.35□□□□□ -1.71
CD28P10747 RPS3AP38-201ENST00000435889 763 ntBASIC4.35□□□□□ -1.71
CD28P10747 OR6D1P-201ENST00000436165 939 ntBASIC4.35□□□□□ -1.71
CD28P10747 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.35□□□□□ -1.71
CD28P10747 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.35□□□□□ -1.71
CD28P10747 AURKAPS1-201ENST00000451805 1212 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.35□□□□□ -1.71
CD28P10747 RN7SL172P-201ENST00000460535 303 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC004815.1-201ENST00000484185 331 ntBASIC4.35□□□□□ -1.71
CD28P10747 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 KATNBL1P4-201ENST00000503545 918 ntBASIC4.35□□□□□ -1.71
CD28P10747 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CD28P10747 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.35□□□□□ -1.71
CD28P10747 AL121594.2-201ENST00000541658 472 ntBASIC4.35□□□□□ -1.71
CD28P10747 HAUS8P1-201ENST00000549005 542 ntBASIC4.35□□□□□ -1.71
CD28P10747 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.35□□□□□ -1.71
CD28P10747 AL049779.2-201ENST00000553847 315 ntBASIC4.35□□□□□ -1.71
CD28P10747 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.35□□□□□ -1.71
CD28P10747 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.35□□□□□ -1.71
CD28P10747 AC107993.1-201ENST00000591343 684 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC008536.1-201ENST00000602872 669 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC093388.1-201ENST00000609166 430 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms