Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RETP07949 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RETP07949 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RETP07949 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RETP07949 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RETP07949 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RETP07949 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
RETP07949 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.76□□□□□ -1.49
RETP07949 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.76□□□□□ -1.49
RETP07949 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
RETP07949 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
RETP07949 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 RN7SKP166-201ENST00000410812 305 ntBASIC5.76□□□□□ -1.49
RETP07949 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.76□□□□□ -1.49
RETP07949 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.76□□□□□ -1.49
RETP07949 AC005033.1-201ENST00000428904 813 ntBASIC5.76□□□□□ -1.49
RETP07949 AC006466.1-201ENST00000438721 289 ntBASIC5.76□□□□□ -1.49
RETP07949 RPS23P9-201ENST00000448848 438 ntBASIC5.76□□□□□ -1.49
RETP07949 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
RETP07949 RPL7P45-201ENST00000455851 743 ntBASIC5.76□□□□□ -1.49
RETP07949 RN7SL222P-201ENST00000476452 299 ntBASIC5.76□□□□□ -1.49
RETP07949 AC087672.1-201ENST00000479876 766 ntBASIC5.76□□□□□ -1.49
RETP07949 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.76□□□□□ -1.49
RETP07949 PGAM1P13-201ENST00000507497 754 ntBASIC5.76□□□□□ -1.49
RETP07949 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
RETP07949 AC021146.10-201ENST00000515628 706 ntBASIC5.76□□□□□ -1.49
RETP07949 TPM3P3-201ENST00000521343 354 ntBASIC5.76□□□□□ -1.49
RETP07949 AC136777.2-201ENST00000522979 358 ntBASIC5.76□□□□□ -1.49
RETP07949 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 OR4A42P-201ENST00000531397 938 ntBASIC5.76□□□□□ -1.49
RETP07949 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.76□□□□□ -1.49
RETP07949 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.76□□□□□ -1.49
RETP07949 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.76□□□□□ -1.49
RETP07949 AC002069.2-201ENST00000603580 883 ntBASIC5.76□□□□□ -1.49
RETP07949 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 AC133644.2-201ENST00000608142 540 ntBASIC5.76□□□□□ -1.49
RETP07949 AL731566.2-201ENST00000618971 317 ntBASIC5.76□□□□□ -1.49
RETP07949 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.76□□□□□ -1.49
RETP07949 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RETP07949 CDY3P-201ENST00000454543 1618 ntBASIC5.76□□□□□ -1.49
RETP07949 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 DNM1P47-203ENST00000571780 12667 ntBASIC5.76□□□□□ -1.49
RETP07949 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETP07949 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RETP07949 AC112255.1-201ENST00000624070 2493 ntBASIC5.75□□□□□ -1.49
RETP07949 MRE11P1-201ENST00000464884 2127 ntBASIC5.75□□□□□ -1.49
RETP07949 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RETP07949 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RETP07949 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 RNA5SP234-201ENST00000363916 119 ntBASIC5.75□□□□□ -1.49
RETP07949 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 AL133173.1-201ENST00000423458 397 ntBASIC5.75□□□□□ -1.49
RETP07949 HMGB1P32-201ENST00000425971 565 ntBASIC5.75□□□□□ -1.49
RETP07949 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 AC099677.3-201ENST00000427081 395 ntBASIC5.75□□□□□ -1.49
RETP07949 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.75□□□□□ -1.49
RETP07949 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.75□□□□□ -1.49
RETP07949 CUBNP2-201ENST00000443534 1139 ntBASIC5.75□□□□□ -1.49
RETP07949 FAR2P1-206ENST00000449736 709 ntBASIC5.75□□□□□ -1.49
RETP07949 AC108751.3-201ENST00000461814 1020 ntBASIC5.75□□□□□ -1.49
RETP07949 RPS3AP15-201ENST00000483874 781 ntBASIC5.75□□□□□ -1.49
RETP07949 AC090638.1-201ENST00000498296 909 ntBASIC5.75□□□□□ -1.49
RETP07949 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.75□□□□□ -1.49
RETP07949 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.75□□□□□ -1.49
RETP07949 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.75□□□□□ -1.49
RETP07949 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.75□□□□□ -1.49
RETP07949 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.75□□□□□ -1.49
RETP07949 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
RETP07949 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.75□□□□□ -1.49
RETP07949 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.75□□□□□ -1.49
RETP07949 MIR4436B2-201ENST00000581415 91 ntBASIC5.75□□□□□ -1.49
RETP07949 MIR4436B1-201ENST00000583272 91 ntBASIC5.75□□□□□ -1.49
RETP07949 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.75□□□□□ -1.49
RETP07949 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.75□□□□□ -1.49
RETP07949 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.75□□□□□ -1.49
RETP07949 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RETP07949 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RETP07949 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms