Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC005840.5-201ENST00000619166 599 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC137056.2-201ENST00000624055 1958 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 U3.25-201ENST00000391209 220 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 GPS2P1-201ENST00000411761 986 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 DSTNP5-201ENST00000427921 523 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 CYCSP6-201ENST00000434498 302 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 GAPDHP25-201ENST00000447061 1001 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC016724.1-201ENST00000453215 421 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC007386.1-201ENST00000455212 582 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 RPL7P45-201ENST00000455851 743 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC093827.1-201ENST00000480094 861 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 PPP1R11P1-201ENST00000486095 376 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC021193.1-201ENST00000511607 420 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC009027.1-201ENST00000604510 479 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AL356608.1-201ENST00000610034 820 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 RNA5SP439-201ENST00000617595 124 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AP003400.3-201ENST00000624904 346 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DQB2P05538 AL592429.1-201ENST00000403909 1473 ntBASIC5.45□□□□□ -1.54
HLA-DQB2P05538 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 ADAM24P-201ENST00000398655 2101 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 RNA5SP339-201ENST00000390987 122 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 RNA5SP487-201ENST00000410186 122 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AL390774.1-201ENST00000411924 246 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AL354766.1-201ENST00000423396 542 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC017019.1-201ENST00000426129 261 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AL121776.1-201ENST00000429337 372 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 RPL5P2-201ENST00000429598 854 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 RPS26P41-201ENST00000450370 284 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC104634.1-201ENST00000452720 462 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC105420.1-201ENST00000504389 582 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC093815.1-201ENST00000508637 280 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 HMGB1P40-201ENST00000525121 540 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 YWHABP2-201ENST00000540201 713 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 NPM1P5-201ENST00000557228 838 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC079395.2-201ENST00000610982 737 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AL049767.1-202ENST00000637826 242 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DQB2P05538 AC109446.4-201ENST00000623235 2755 ntBASIC5.44□□□□□ -1.54
HLA-DQB2P05538 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms