Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.65□□□□□ -1.67
CD74P04233 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 AC024884.1-201ENST00000620583 399 ntBASIC4.65□□□□□ -1.67
CD74P04233 AC074140.1-201ENST00000621617 208 ntBASIC4.65□□□□□ -1.67
CD74P04233 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CD74P04233 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.65□□□□□ -1.67
CD74P04233 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.65□□□□□ -1.67
CD74P04233 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD74P04233 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD74P04233 RAB5CP1-201ENST00000395972 580 ntBASIC4.64□□□□□ -1.67
CD74P04233 RPS6P23-201ENST00000413224 722 ntBASIC4.64□□□□□ -1.67
CD74P04233 AL035422.1-201ENST00000414193 397 ntBASIC4.64□□□□□ -1.67
CD74P04233 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.64□□□□□ -1.67
CD74P04233 AC092865.3-201ENST00000425390 1026 ntBASIC4.64□□□□□ -1.67
CD74P04233 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 AC073909.1-201ENST00000447112 999 ntBASIC4.64□□□□□ -1.67
CD74P04233 AC005077.1-201ENST00000449226 375 ntBASIC4.64□□□□□ -1.67
CD74P04233 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.64□□□□□ -1.67
CD74P04233 HMGN1P17-201ENST00000513734 295 ntBASIC4.64□□□□□ -1.67
CD74P04233 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 AC021678.3-201ENST00000517893 476 ntBASIC4.64□□□□□ -1.67
CD74P04233 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.64□□□□□ -1.67
CD74P04233 AP006245.2-201ENST00000522004 300 ntBASIC4.64□□□□□ -1.67
CD74P04233 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 HSPE1P2-201ENST00000554777 306 ntBASIC4.64□□□□□ -1.67
CD74P04233 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD74P04233 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 AC006349.1-201ENST00000555526 235 ntBASIC4.64□□□□□ -1.67
CD74P04233 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.64□□□□□ -1.67
CD74P04233 RN7SL230P-201ENST00000580835 303 ntBASIC4.64□□□□□ -1.67
CD74P04233 AP005262.1-201ENST00000582646 997 ntBASIC4.64□□□□□ -1.67
CD74P04233 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.64□□□□□ -1.67
CD74P04233 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.64□□□□□ -1.67
CD74P04233 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 AC012368.3-201ENST00000604190 219 ntBASIC4.64□□□□□ -1.67
CD74P04233 AC022919.1-201ENST00000624979 626 ntBASIC4.64□□□□□ -1.67
CD74P04233 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 AC073869.8-201ENST00000641806 335 ntBASIC4.64□□□□□ -1.67
CD74P04233 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 MT-RNR2-201ENST00000387347 1559 ntBASIC4.64□□□□□ -1.67
CD74P04233 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 AP001642.1-201ENST00000624727 2117 ntBASIC4.64□□□□□ -1.67
CD74P04233 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CD74P04233 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.64□□□□□ -1.67
CD74P04233 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CD74P04233 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 AC245100.2-201ENST00000454544 1679 ntBASIC4.64□□□□□ -1.67
CD74P04233 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.64□□□□□ -1.67
CD74P04233 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 AL034549.2-201ENST00000618285 3373 ntBASIC4.64□□□□□ -1.67
CD74P04233 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD74P04233 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CD74P04233 AC000374.1-201ENST00000434698 1745 ntBASIC4.63□□□□□ -1.67
CD74P04233 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
CD74P04233 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.63□□□□□ -1.67
CD74P04233 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.63□□□□□ -1.67
CD74P04233 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD74P04233 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CD74P04233 VN1R12P-201ENST00000403778 876 ntBASIC4.63□□□□□ -1.67
CD74P04233 PCNPP4-201ENST00000414817 517 ntBASIC4.63□□□□□ -1.67
CD74P04233 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.63□□□□□ -1.67
CD74P04233 AC099782.1-201ENST00000425889 474 ntBASIC4.63□□□□□ -1.67
CD74P04233 RPL34P6-201ENST00000432390 345 ntBASIC4.63□□□□□ -1.67
CD74P04233 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.63□□□□□ -1.67
CD74P04233 MTND6P5-201ENST00000448266 512 ntBASIC4.63□□□□□ -1.67
CD74P04233 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.63□□□□□ -1.67
CD74P04233 CTSLP6-201ENST00000458273 1002 ntBASIC4.63□□□□□ -1.67
CD74P04233 RPS17P15-201ENST00000475609 349 ntBASIC4.63□□□□□ -1.67
CD74P04233 OR11I1P-201ENST00000486033 954 ntBASIC4.63□□□□□ -1.67
CD74P04233 AC009120.1-201ENST00000493458 473 ntBASIC4.63□□□□□ -1.67
CD74P04233 RN7SL57P-201ENST00000493687 290 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms