Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC015720.2-201ENST00000567709 334 ntBASIC6.69□□□□□ -1.34
MBD4O95243 MIR4489-201ENST00000578869 62 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AC060780.2-201ENST00000589047 198 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.69□□□□□ -1.34
MBD4O95243 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.69□□□□□ -1.34
MBD4O95243 AL512624.1-201ENST00000613638 469 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AC007204.2-201ENST00000615022 616 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AF117829.2-201ENST00000619538 361 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AC132068.1-201ENST00000623805 459 ntBASIC6.69□□□□□ -1.34
MBD4O95243 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.69□□□□□ -1.34
MBD4O95243 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
MBD4O95243 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 KYNUP3-201ENST00000574386 1341 ntBASIC6.69□□□□□ -1.34
MBD4O95243 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.69□□□□□ -1.34
MBD4O95243 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
MBD4O95243 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
MBD4O95243 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
MBD4O95243 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
MBD4O95243 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 LINC01963-201ENST00000562038 3148 ntBASIC6.68□□□□□ -1.34
MBD4O95243 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.68□□□□□ -1.34
MBD4O95243 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 AL139039.2-201ENST00000407436 479 ntBASIC6.68□□□□□ -1.34
MBD4O95243 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.68□□□□□ -1.34
MBD4O95243 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.68□□□□□ -1.34
MBD4O95243 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.68□□□□□ -1.34
MBD4O95243 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.68□□□□□ -1.34
MBD4O95243 REG1CP-206ENST00000447469 496 ntBASIC6.68□□□□□ -1.34
MBD4O95243 RPL31P53-201ENST00000457065 348 ntBASIC6.68□□□□□ -1.34
MBD4O95243 AC100832.1-201ENST00000471945 383 ntBASIC6.68□□□□□ -1.34
MBD4O95243 RN7SL583P-201ENST00000475692 287 ntBASIC6.68□□□□□ -1.34
MBD4O95243 CR383656.1-201ENST00000484916 377 ntBASIC6.68□□□□□ -1.34
MBD4O95243 RN7SL547P-201ENST00000490793 290 ntBASIC6.68□□□□□ -1.34
MBD4O95243 ATG10-AS1-201ENST00000504846 648 ntBASIC6.68□□□□□ -1.34
MBD4O95243 RN7SKP253-201ENST00000516424 309 ntBASIC6.68□□□□□ -1.34
MBD4O95243 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 AP001267.4-201ENST00000602598 545 ntBASIC6.68□□□□□ -1.34
MBD4O95243 AP000894.4-201ENST00000610185 483 ntBASIC6.68□□□□□ -1.34
MBD4O95243 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.68□□□□□ -1.34
MBD4O95243 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
MBD4O95243 AC140479.2-201ENST00000421567 3130 ntBASIC6.68□□□□□ -1.34
MBD4O95243 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.68□□□□□ -1.34
MBD4O95243 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.68□□□□□ -1.34
MBD4O95243 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MBD4O95243 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MBD4O95243 AL121886.1-201ENST00000358609 435 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.67□□□□□ -1.34
MBD4O95243 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MBD4O95243 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AL009179.1-201ENST00000406085 265 ntBASIC6.67□□□□□ -1.34
MBD4O95243 RPSAP35-201ENST00000413753 818 ntBASIC6.67□□□□□ -1.34
MBD4O95243 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.67□□□□□ -1.34
MBD4O95243 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 AJ239321.1-201ENST00000424255 564 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AL590399.2-201ENST00000427536 309 ntBASIC6.67□□□□□ -1.34
MBD4O95243 NANOGP9-201ENST00000439890 892 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AL596266.1-201ENST00000448132 400 ntBASIC6.67□□□□□ -1.34
MBD4O95243 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.67□□□□□ -1.34
MBD4O95243 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.67□□□□□ -1.34
MBD4O95243 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 AC090638.1-201ENST00000498296 909 ntBASIC6.67□□□□□ -1.34
MBD4O95243 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
MBD4O95243 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
MBD4O95243 PMS2P3-207ENST00000529061 717 ntBASIC6.67□□□□□ -1.34
MBD4O95243 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.67□□□□□ -1.34
MBD4O95243 AC008126.1-201ENST00000549019 480 ntBASIC6.67□□□□□ -1.34
MBD4O95243 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.67□□□□□ -1.34
MBD4O95243 MIR3176-201ENST00000582210 90 ntBASIC6.67□□□□□ -1.34
MBD4O95243 AC010245.2-201ENST00000606908 1167 ntBASIC6.67□□□□□ -1.34
MBD4O95243 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 AL359513.1-201ENST00000614364 557 ntBASIC6.67□□□□□ -1.34
MBD4O95243 MIR8080-201ENST00000622224 89 ntBASIC6.67□□□□□ -1.34
MBD4O95243 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
MBD4O95243 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 AC025470.1-201ENST00000510053 2032 ntBASIC6.67□□□□□ -1.34
MBD4O95243 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.67□□□□□ -1.34
MBD4O95243 CASC19-248ENST00000641674 1356 ntBASIC6.67□□□□□ -1.34
MBD4O95243 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MBD4O95243 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 AC104964.3-201ENST00000606115 2860 ntBASIC6.67□□□□□ -1.34
MBD4O95243 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
MBD4O95243 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms