Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 RN7SKP69-201ENST00000365390 305 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 SUGT1P2-201ENST00000379452 992 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 OR7E101P-201ENST00000400428 513 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC079809.1-201ENST00000415468 276 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 BX323845.3-201ENST00000428215 527 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC069154.1-201ENST00000432914 542 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 HMGB3P24-201ENST00000433260 622 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 CYCSP51-201ENST00000443545 318 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AL157385.1-201ENST00000446973 268 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AL358876.1-201ENST00000453364 1075 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC087672.1-201ENST00000479876 766 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC021106.1-201ENST00000509020 1058 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC022784.5-201ENST00000522241 437 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC28A1O00337 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC244100.4-201ENST00000617747 388 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 AL390318.1-201ENST00000624564 687 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 AC015689.2-201ENST00000528172 1738 ntBASIC5.36□□□□□ -1.55
SLC28A1O00337 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC28A1O00337 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC28A1O00337 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC28A1O00337 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 CDC27P2-201ENST00000425026 1922 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC28A1O00337 RNU1-65P-201ENST00000363919 148 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC28A1O00337 SNORD56.6-201ENST00000384569 71 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC004386.1-201ENST00000393214 761 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 AC234781.4-201ENST00000419384 244 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 RCC2P2-201ENST00000422174 918 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 RFESDP1-201ENST00000422350 461 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC28A1O00337 MTCO1P51-201ENST00000427672 1060 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC239798.3-201ENST00000454459 408 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 RN7SKP183-201ENST00000517169 324 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SLC28A1O00337 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC28A1O00337 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC28A1O00337 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC009237.13-201ENST00000603193 276 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 GMCL1P2-201ENST00000605230 823 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 RN7SL544P-201ENST00000617232 284 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 RN7SL763P-201ENST00000620922 284 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AC073592.6-201ENST00000624271 415 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC28A1O00337 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SLC28A1O00337 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC28A1O00337 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC28A1O00337 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC28A1O00337 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC28A1O00337 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms