Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 SNORA38B-201ENST00000363524 131 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 RN7SKP273-201ENST00000411392 314 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 TPT1P2-201ENST00000413105 503 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 NPM1P11-201ENST00000417106 855 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 NIPA2P1-201ENST00000426223 976 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC083862.1-201ENST00000427378 1242 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AL121776.1-201ENST00000429337 372 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 RPL5P14-201ENST00000494197 878 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC027801.3-201ENST00000515049 698 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 RNA5SP418-201ENST00000515951 117 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 NDUFA5P2-201ENST00000519723 344 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC008055.1-201ENST00000547032 609 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AL162632.2-201ENST00000553933 399 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 OR4K7P-201ENST00000580232 945 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 MIR4701-201ENST00000583094 63 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AC009237.12-201ENST00000604755 742 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 RBM11P1-201ENST00000604951 799 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AF001550.2-201ENST00000636643 217 ntBASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
TMEM88BA6NKF7 MAPK10-371ENST00000641952 5209 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 RNU4-75P-201ENST00000364621 146 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 RN7SKP47-201ENST00000365347 328 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 PRUNEP1-201ENST00000425846 705 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AL121916.1-201ENST00000429405 308 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ATP5LP2-201ENST00000440646 311 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AL645936.1-201ENST00000441979 518 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 VN1R32P-201ENST00000452234 905 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 DNAJC19P8-201ENST00000452887 259 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 RN7SL610P-201ENST00000463845 291 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 MTND1P16-201ENST00000465177 898 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 RN7SL187P-201ENST00000495587 303 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AL136038.1-201ENST00000497246 351 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ATP5LP3-201ENST00000514223 304 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ZDHHC20P3-201ENST00000531576 336 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC008083.2-201ENST00000546707 476 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms