Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC125238.2-201ENST00000430003 1440 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 EEF1A1P2-201ENST00000553854 1447 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 Y_RNA.209-201ENST00000364156 111 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RNU6-660P-201ENST00000364566 109 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RNU6-185P-201ENST00000384421 107 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL139098.1-201ENST00000407291 389 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MEAF6P1-201ENST00000416092 327 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AP003385.1-201ENST00000426387 893 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MTND4LP16-201ENST00000440828 295 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MTATP6P30-201ENST00000443540 664 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MTCO1P48-201ENST00000448024 1096 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL034418.1-201ENST00000448675 860 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 EPS15P1-201ENST00000448836 336 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 DNAJC19P8-201ENST00000452887 259 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RPL34P34-201ENST00000465389 354 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RN7SL797P-201ENST00000486314 297 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RN7SL608P-201ENST00000492377 279 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC073581.1-201ENST00000519036 575 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL591767.3-201ENST00000554632 525 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC087575.1-201ENST00000585087 229 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL049829.3-202ENST00000604278 711 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AP003117.2-201ENST00000606010 545 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC008945.2-201ENST00000606056 604 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AL139123.1-201ENST00000612008 430 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CR383658.2-201ENST00000547576 1525 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 GTF2H2B-203ENST00000508065 1432 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MTCO1P23-201ENST00000415223 1526 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPL11P4-201ENST00000332269 436 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RNA5SP238-201ENST00000365464 120 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 Y_RNA.408-201ENST00000383987 102 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RNU6-1263P-201ENST00000384601 106 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MIR16-1-201ENST00000385271 89 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RNU6-244P-201ENST00000391028 104 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 CIR1P3-201ENST00000405137 479 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHISA3A0PJX4 AL139158.1-201ENST00000424719 340 ntBASIC6.17□□□□□ -1.42
SHISA3A0PJX4 RPL19P21-201ENST00000424919 591 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms