Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPBQ9Y5S2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 KRT18P48-201ENST00000434763 852 ntBASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC29.83■■■□□ 2.37
CDC42BPBQ9Y5S2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AC011558.1-201ENST00000623459 338 ntBASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 KRT8P41-201ENST00000533985 1514 ntBASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 AL353719.1-201ENST00000566847 864 ntBASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.82■■■□□ 2.36
CDC42BPBQ9Y5S2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 AC092647.4-201ENST00000457211 535 ntBASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 AC069148.1-201ENST00000608741 768 ntBASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC29.81■■■□□ 2.36
CDC42BPBQ9Y5S2 AL671277.2-201ENST00000458060 996 ntBASIC29.8■■■□□ 2.36
CDC42BPBQ9Y5S2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPBQ9Y5S2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPBQ9Y5S2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPBQ9Y5S2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CDC42BPBQ9Y5S2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPBQ9Y5S2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPBQ9Y5S2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 AC093458.2-201ENST00000623150 629 ntBASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 AP001271.2-201ENST00000624018 1556 ntBASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPBQ9Y5S2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CDC42BPBQ9Y5S2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC29.76■■■□□ 2.36
CDC42BPBQ9Y5S2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
CDC42BPBQ9Y5S2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC29.76■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms