Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 AL121906.2-201ENST00000621597 723 ntBASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 NBPF21P-201ENST00000425093 1451 ntBASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 AC010331.1-201ENST00000611423 582 ntBASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA3Q9Y5H0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 KRT18P21-201ENST00000515767 1272 ntBASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 AP003071.4-201ENST00000562276 1284 ntBASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA3Q9Y5H0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 AL355355.2-201ENST00000442321 338 ntBASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 CD177P1-201ENST00000606252 935 ntBASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA3Q9Y5H0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA3Q9Y5H0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms