Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB2Q9Y5E7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDHB2Q9Y5E7 AC018553.1-201ENST00000616682 1458 ntBASIC21.52■■□□□ 1.03
PCDHB2Q9Y5E7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 TFP1-202ENST00000475455 1573 ntBASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB2Q9Y5E7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 LINC01023-201ENST00000606054 436 ntBASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 AC112907.3-201ENST00000577781 2400 ntBASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB2Q9Y5E7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 AC087499.1-201ENST00000418141 1075 ntBASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB2Q9Y5E7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 SLC25A24-204ENST00000569674 2357 ntBASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB2Q9Y5E7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms