Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 AC005829.2-201ENST00000571422 1056 ntBASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 AC110285.5-201ENST00000611501 352 ntBASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 PTBP1P-201ENST00000554374 1601 ntBASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 MIR4785-201ENST00000585005 73 ntBASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AP001412.1-201ENST00000608405 714 ntBASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AC113410.3-201ENST00000623366 203 ntBASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 AL162377.1-201ENST00000618844 1793 ntBASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC3AQ9Y2H6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 AC133561.5-201ENST00000635547 218 ntBASIC20.02■□□□□ 0.8
FNDC3AQ9Y2H6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC3AQ9Y2H6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC3AQ9Y2H6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC3AQ9Y2H6 AL135905.2-201ENST00000584934 1404 ntBASIC20.02■□□□□ 0.79
FNDC3AQ9Y2H6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 AC087499.1-201ENST00000418141 1075 ntBASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC3AQ9Y2H6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC3AQ9Y2H6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms