Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP2BQ9UQN3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2BQ9UQN3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP2BQ9UQN3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 AL162430.1-201ENST00000480705 870 ntBASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2BQ9UQN3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms