Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 AL158211.5-201ENST00000623583 2518 ntBASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 RPPH1-201ENST00000516869 333 ntBASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA4Q9UN74 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.45■■□□□ 1.19
PCDHA4Q9UN74 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 AC110285.5-201ENST00000611501 352 ntBASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA4Q9UN74 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 AC098590.1-201ENST00000468126 897 ntBASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 AL359736.2-201ENST00000621992 437 ntBASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA4Q9UN74 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 TUBB8P6-201ENST00000436895 1288 ntBASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 AC004264.1-201ENST00000608354 794 ntBASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA4Q9UN74 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHA4Q9UN74 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms