Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 MIR4651-201ENST00000582622 73 ntBASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGC3Q9UN70 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGC3Q9UN70 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 KRT8P8-201ENST00000434750 1448 ntBASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 POU5F1P3-201ENST00000428824 1078 ntBASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC3Q9UN70 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGC3Q9UN70 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.7■□□□□ 0.91
PCDHGC3Q9UN70 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGC3Q9UN70 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 AC073648.6-201ENST00000641589 218 ntBASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 AC093484.2-201ENST00000580996 2166 ntBASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC3Q9UN70 NBPF21P-201ENST00000425093 1451 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms