Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PCDHB16Q9NRJ7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 KRT8P17-201ENST00000453110 1448 ntBASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 AC005332.8-201ENST00000622750 2735 ntBASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB16Q9NRJ7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 HLA-G-202ENST00000376815 851 ntBASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 HLA-G-203ENST00000376818 1127 ntBASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB16Q9NRJ7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC009237.14-201ENST00000609975 1594 ntBASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 KRT8P20-201ENST00000423953 1409 ntBASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 KRT18P5-201ENST00000436075 1291 ntBASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms