Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 AL138781.2-201ENST00000617896 1843 ntBASIC20.43■□□□□ 0.86
DDX47Q9H0S4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.42■□□□□ 0.86
DDX47Q9H0S4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 MFSD11-216ENST00000590393 1141 ntBASIC20.42■□□□□ 0.86
DDX47Q9H0S4 AC100791.3-201ENST00000617619 330 ntBASIC20.42■□□□□ 0.86
DDX47Q9H0S4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 CROCCP3-202ENST00000420820 1947 ntBASIC20.42■□□□□ 0.86
DDX47Q9H0S4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX47Q9H0S4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 HLA-G-202ENST00000376815 851 ntBASIC20.41■□□□□ 0.86
DDX47Q9H0S4 HLA-G-203ENST00000376818 1127 ntBASIC20.41■□□□□ 0.86
DDX47Q9H0S4 KRT18P68-201ENST00000392293 1000 ntBASIC20.41■□□□□ 0.86
DDX47Q9H0S4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
DDX47Q9H0S4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 AL049812.1-201ENST00000432563 2267 ntBASIC20.4■□□□□ 0.86
DDX47Q9H0S4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 AC007613.1-201ENST00000572811 2597 ntBASIC20.4■□□□□ 0.86
DDX47Q9H0S4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX47Q9H0S4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 AL161938.1-201ENST00000569833 2180 ntBASIC20.39■□□□□ 0.86
DDX47Q9H0S4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX47Q9H0S4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 NTF6G-201ENST00000591094 616 ntBASIC20.39■□□□□ 0.85
DDX47Q9H0S4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms