Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 AC084018.2-201ENST00000613093 2607 ntBASIC15.87■□□□□ 0.13
NKX6-2Q9C056 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 AC099791.2-201ENST00000605725 427 ntBASIC15.87■□□□□ 0.13
NKX6-2Q9C056 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX6-2Q9C056 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NKX6-2Q9C056 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 AC046158.3-201ENST00000624947 2558 ntBASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NKX6-2Q9C056 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NKX6-2Q9C056 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms