Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 SLC25A1P2-201ENST00000430693 912 ntBASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 AL512604.3-201ENST00000569583 964 ntBASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 AC027796.2-201ENST00000575326 344 ntBASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 LINC01311-201ENST00000565162 1445 ntBASIC18.72■□□□□ 0.59
CNTNAP3Q9BZ76 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 MRPL3P1-201ENST00000400109 1033 ntBASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 NUS1P1-201ENST00000446295 882 ntBASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CNTNAP3Q9BZ76 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CNTNAP3Q9BZ76 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CNTNAP3Q9BZ76 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 PMS2P2-201ENST00000425039 1128 ntBASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 KRT18P1-202ENST00000452408 1331 ntBASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3Q9BZ76 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 HYMAI.1-201ENST00000620949 238 ntBASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 HLA-A-201ENST00000376802 1334 ntBASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AC087742.1-201ENST00000575880 1738 ntBASIC18.69■□□□□ 0.58
CNTNAP3Q9BZ76 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 AC092338.2-201ENST00000568827 1415 ntBASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 MIR564-202ENST00000385049 94 ntBASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3Q9BZ76 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms