Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM54Q9BYV2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AC125437.2-201ENST00000625180 2167 ntBASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AC104771.1-201ENST00000603335 964 ntBASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 HLA-B-256ENST00000639848 1089 ntBASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 MYC-209ENST00000641252 345 ntBASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AC092368.3-202ENST00000574180 1591 ntBASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM54Q9BYV2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRIM54Q9BYV2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM54Q9BYV2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 AC069152.1-201ENST00000438030 544 ntBASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM54Q9BYV2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM54Q9BYV2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms