Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.85■□□□□ 0.77
PHOX2BQ99453 FAAHP1-202ENST00000446499 1238 ntBASIC19.85■□□□□ 0.77
PHOX2BQ99453 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 AL136038.3-201ENST00000561909 1096 ntBASIC19.85■□□□□ 0.77
PHOX2BQ99453 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
PHOX2BQ99453 AL671883.3-201ENST00000603274 991 ntBASIC19.85■□□□□ 0.77
PHOX2BQ99453 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHOX2BQ99453 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 NPAP1P7-201ENST00000613027 823 ntBASIC19.84■□□□□ 0.77
PHOX2BQ99453 AC008622.2-201ENST00000617006 1229 ntBASIC19.84■□□□□ 0.77
PHOX2BQ99453 AL023973.1-201ENST00000624619 620 ntBASIC19.84■□□□□ 0.77
PHOX2BQ99453 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
PHOX2BQ99453 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHOX2BQ99453 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHOX2BQ99453 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PHOX2BQ99453 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHOX2BQ99453 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHOX2BQ99453 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHOX2BQ99453 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.83■□□□□ 0.77
PHOX2BQ99453 PRSS44-201ENST00000515154 1146 ntBASIC19.83■□□□□ 0.77
PHOX2BQ99453 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PHOX2BQ99453 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.83■□□□□ 0.76
PHOX2BQ99453 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHOX2BQ99453 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.83■□□□□ 0.76
PHOX2BQ99453 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHOX2BQ99453 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PHOX2BQ99453 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.83■□□□□ 0.76
PHOX2BQ99453 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.83■□□□□ 0.76
PHOX2BQ99453 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 AC092183.1-201ENST00000469884 875 ntBASIC19.82■□□□□ 0.76
PHOX2BQ99453 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.82■□□□□ 0.76
PHOX2BQ99453 AC116562.4-202ENST00000641738 218 ntBASIC19.82■□□□□ 0.76
PHOX2BQ99453 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHOX2BQ99453 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHOX2BQ99453 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHOX2BQ99453 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHOX2BQ99453 AC026471.6-201ENST00000622954 1905 ntBASIC19.81■□□□□ 0.76
PHOX2BQ99453 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHOX2BQ99453 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.81■□□□□ 0.76
PHOX2BQ99453 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms