Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
SPENQ96T58 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.77■□□□□ 0.44
SPENQ96T58 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.77■□□□□ 0.44
SPENQ96T58 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 AP006587.1-201ENST00000534129 1502 ntBASIC17.77■□□□□ 0.44
SPENQ96T58 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.77■□□□□ 0.44
SPENQ96T58 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SPENQ96T58 AP000347.1-202ENST00000435868 847 ntBASIC17.77■□□□□ 0.44
SPENQ96T58 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SPENQ96T58 AL137060.1-201ENST00000618151 2648 ntBASIC17.77■□□□□ 0.44
SPENQ96T58 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.77■□□□□ 0.44
SPENQ96T58 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.77■□□□□ 0.43
SPENQ96T58 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.77■□□□□ 0.43
SPENQ96T58 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.77■□□□□ 0.43
SPENQ96T58 YBX1P10-201ENST00000444752 975 ntBASIC17.77■□□□□ 0.43
SPENQ96T58 Z85996.1-201ENST00000494644 937 ntBASIC17.77■□□□□ 0.43
SPENQ96T58 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPENQ96T58 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.76■□□□□ 0.43
SPENQ96T58 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 AC007663.1-201ENST00000438948 1240 ntBASIC17.76■□□□□ 0.43
SPENQ96T58 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.76■□□□□ 0.43
SPENQ96T58 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.76■□□□□ 0.43
SPENQ96T58 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.76■□□□□ 0.43
SPENQ96T58 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.76■□□□□ 0.43
SPENQ96T58 TFP1-202ENST00000475455 1573 ntBASIC17.76■□□□□ 0.43
SPENQ96T58 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SPENQ96T58 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SPENQ96T58 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 MFAP1P1-201ENST00000442257 1255 ntBASIC17.76■□□□□ 0.43
SPENQ96T58 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.76■□□□□ 0.43
SPENQ96T58 AL671883.3-201ENST00000603274 991 ntBASIC17.76■□□□□ 0.43
SPENQ96T58 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SPENQ96T58 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.76■□□□□ 0.43
SPENQ96T58 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.76■□□□□ 0.43
SPENQ96T58 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SPENQ96T58 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPENQ96T58 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.75■□□□□ 0.43
SPENQ96T58 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.75■□□□□ 0.43
SPENQ96T58 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.75■□□□□ 0.43
SPENQ96T58 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.75■□□□□ 0.43
SPENQ96T58 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
SPENQ96T58 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.75■□□□□ 0.43
SPENQ96T58 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.75■□□□□ 0.43
SPENQ96T58 TSPY5P-201ENST00000426936 936 ntBASIC17.75■□□□□ 0.43
SPENQ96T58 AC011558.1-201ENST00000623459 338 ntBASIC17.75■□□□□ 0.43
SPENQ96T58 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SPENQ96T58 DPP3P2-201ENST00000416030 1696 ntBASIC17.75■□□□□ 0.43
SPENQ96T58 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 AC011506.1-201ENST00000474329 610 ntBASIC17.75■□□□□ 0.43
SPENQ96T58 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPENQ96T58 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.75■□□□□ 0.43
SPENQ96T58 HMGA1P5-201ENST00000412453 271 ntBASIC17.74■□□□□ 0.43
SPENQ96T58 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SPENQ96T58 IER3-202ENST00000376377 1350 ntBASIC17.74■□□□□ 0.43
SPENQ96T58 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.74■□□□□ 0.43
SPENQ96T58 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 SLC25A1P2-201ENST00000430693 912 ntBASIC17.74■□□□□ 0.43
SPENQ96T58 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.74■□□□□ 0.43
SPENQ96T58 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.74■□□□□ 0.43
SPENQ96T58 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPENQ96T58 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.74■□□□□ 0.43
SPENQ96T58 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SPENQ96T58 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.73■□□□□ 0.43
SPENQ96T58 PCED1CP-201ENST00000419887 785 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 TSPY21P-201ENST00000433481 731 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 TSPY23P-201ENST00000440136 739 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SPENQ96T58 AL121956.5-201ENST00000625261 221 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.73■□□□□ 0.43
SPENQ96T58 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPENQ96T58 AC246785.2-201ENST00000432512 513 ntBASIC17.73■□□□□ 0.43
SPENQ96T58 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.73■□□□□ 0.43
SPENQ96T58 COX11P1-201ENST00000489116 835 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms