Protein–RNA interactions for Protein: Q96T23

RSF1, Remodeling and spacing factor 1, humanhuman

Predicted RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1Q96T23 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC35.12■■■■□ 3.21
RSF1Q96T23 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
RSF1Q96T23 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC35.12■■■■□ 3.21
RSF1Q96T23 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC35.12■■■■□ 3.21
RSF1Q96T23 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
RSF1Q96T23 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
RSF1Q96T23 AP001271.2-201ENST00000624018 1556 ntBASIC35.11■■■■□ 3.21
RSF1Q96T23 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
RSF1Q96T23 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC35.11■■■■□ 3.21
RSF1Q96T23 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC35.11■■■■□ 3.21
RSF1Q96T23 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
RSF1Q96T23 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC35.11■■■■□ 3.21
RSF1Q96T23 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC35.11■■■■□ 3.21
RSF1Q96T23 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC35.1■■■■□ 3.21
RSF1Q96T23 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
RSF1Q96T23 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 NME1-207ENST00000480143 964 ntTSL 2 BASIC35.1■■■■□ 3.21
RSF1Q96T23 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
RSF1Q96T23 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 KRT8P41-201ENST00000533985 1514 ntBASIC35.1■■■■□ 3.21
RSF1Q96T23 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
RSF1Q96T23 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
RSF1Q96T23 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
RSF1Q96T23 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
RSF1Q96T23 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC35.09■■■■□ 3.21
RSF1Q96T23 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
RSF1Q96T23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC35.09■■■■□ 3.21
RSF1Q96T23 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 AK4P3-201ENST00000418260 669 ntBASIC35.09■■■■□ 3.21
RSF1Q96T23 LIN28AP1-201ENST00000429574 405 ntBASIC35.09■■■■□ 3.21
RSF1Q96T23 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC35.09■■■■□ 3.21
RSF1Q96T23 AC010653.2-201ENST00000623505 997 ntBASIC35.09■■■■□ 3.21
RSF1Q96T23 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
RSF1Q96T23 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
RSF1Q96T23 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC35.08■■■■□ 3.21
RSF1Q96T23 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
RSF1Q96T23 BX664615.1-201ENST00000443558 458 ntBASIC35.08■■■■□ 3.21
RSF1Q96T23 ATP5G1P1-201ENST00000448724 379 ntBASIC35.08■■■■□ 3.21
RSF1Q96T23 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC35.08■■■■□ 3.21
RSF1Q96T23 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC35.08■■■■□ 3.21
RSF1Q96T23 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
RSF1Q96T23 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC35.08■■■■□ 3.21
RSF1Q96T23 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC35.08■■■■□ 3.21
RSF1Q96T23 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC35.08■■■■□ 3.21
RSF1Q96T23 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
RSF1Q96T23 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC35.07■■■■□ 3.21
RSF1Q96T23 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC35.07■■■■□ 3.21
RSF1Q96T23 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC35.07■■■■□ 3.21
RSF1Q96T23 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC35.07■■■■□ 3.21
RSF1Q96T23 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
RSF1Q96T23 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
RSF1Q96T23 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC35.07■■■■□ 3.2
RSF1Q96T23 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC35.07■■■■□ 3.2
RSF1Q96T23 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
RSF1Q96T23 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
RSF1Q96T23 AC087388.1-201ENST00000571370 1112 ntBASIC35.06■■■■□ 3.2
RSF1Q96T23 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
RSF1Q96T23 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
RSF1Q96T23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
RSF1Q96T23 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
RSF1Q96T23 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC35.06■■■■□ 3.2
RSF1Q96T23 DERL1-203ENST00000419562 918 ntTSL 2 BASIC35.06■■■■□ 3.2
RSF1Q96T23 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC35.06■■■■□ 3.2
RSF1Q96T23 CYGB-204ENST00000589342 815 ntTSL 3 BASIC35.06■■■■□ 3.2
RSF1Q96T23 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC35.06■■■■□ 3.2
RSF1Q96T23 AC116562.4-202ENST00000641738 218 ntBASIC35.06■■■■□ 3.2
RSF1Q96T23 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC35.05■■■■□ 3.2
RSF1Q96T23 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 LINC01465-201ENST00000408887 1940 ntBASIC35.05■■■■□ 3.2
RSF1Q96T23 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
RSF1Q96T23 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC35.05■■■■□ 3.2
RSF1Q96T23 YBX1P2-201ENST00000489612 999 ntBASIC35.05■■■■□ 3.2
RSF1Q96T23 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RSF1Q96T23 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
RSF1Q96T23 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
RSF1Q96T23 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
RSF1Q96T23 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
RSF1Q96T23 AC020907.5-201ENST00000624372 1936 ntBASIC35.04■■■■□ 3.2
RSF1Q96T23 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC35.04■■■■□ 3.2
RSF1Q96T23 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
RSF1Q96T23 AC139887.4-201ENST00000607877 719 ntBASIC35.04■■■■□ 3.2
RSF1Q96T23 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC35.04■■■■□ 3.2
RSF1Q96T23 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
RSF1Q96T23 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC35.03■■■■□ 3.2
RSF1Q96T23 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms