Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.2■■□□□ 1.3
CDK5RAP2Q96SN8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.2■■□□□ 1.3
CDK5RAP2Q96SN8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDK5RAP2Q96SN8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 AC010331.1-201ENST00000611423 582 ntBASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 AC131212.4-201ENST00000623606 975 ntBASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 LINC01568-207ENST00000641790 1380 ntBASIC23.19■■□□□ 1.3
CDK5RAP2Q96SN8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 TERF1P1-201ENST00000311003 1181 ntBASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.18■■□□□ 1.3
CDK5RAP2Q96SN8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 AC092865.7-201ENST00000641832 219 ntBASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 AC005521.1-201ENST00000393351 872 ntBASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 TMPOP1-202ENST00000424642 1267 ntBASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 AP005242.2-201ENST00000580065 1175 ntBASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 KRT8P41-201ENST00000533985 1514 ntBASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
CDK5RAP2Q96SN8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 AC004951.3-201ENST00000418645 1148 ntBASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 FAM207BP-201ENST00000447172 505 ntBASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 LINC01465-201ENST00000408887 1940 ntBASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDK5RAP2Q96SN8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AC091390.4-202ENST00000476426 537 ntBASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AC009237.14-201ENST00000609975 1594 ntBASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 LINC01006-201ENST00000333319 2292 ntBASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 ECEL1P2-202ENST00000465689 757 ntBASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.15■■□□□ 1.3
CDK5RAP2Q96SN8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms