Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT43Q96FT9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT43Q96FT9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT43Q96FT9 AC026471.1-201ENST00000564629 3026 ntBASIC20.16■□□□□ 0.82
IFT43Q96FT9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 TCF3P1-201ENST00000423021 1937 ntBASIC20.16■□□□□ 0.82
IFT43Q96FT9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
IFT43Q96FT9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT43Q96FT9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 LETM1P2-201ENST00000597330 2178 ntBASIC20.15■□□□□ 0.82
IFT43Q96FT9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.15■□□□□ 0.82
IFT43Q96FT9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 AC005829.2-201ENST00000571422 1056 ntBASIC20.15■□□□□ 0.82
IFT43Q96FT9 AL359736.2-201ENST00000621992 437 ntBASIC20.15■□□□□ 0.82
IFT43Q96FT9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
IFT43Q96FT9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.15■□□□□ 0.82
IFT43Q96FT9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
IFT43Q96FT9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
IFT43Q96FT9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms