Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC3Q96DC8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 AL049637.2-201ENST00000641778 930 ntBASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 KRT8P8-201ENST00000434750 1448 ntBASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC3Q96DC8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 NIFKP9-201ENST00000419265 221 ntBASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 AP001412.1-201ENST00000608405 714 ntBASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 AC113410.3-201ENST00000623366 203 ntBASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC3Q96DC8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ECHDC3Q96DC8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC3Q96DC8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC3Q96DC8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC3Q96DC8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 AL596275.1-201ENST00000423464 877 ntBASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 AC073195.1-201ENST00000607241 877 ntBASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms