Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.28■■□□□ 1.64
ZNF428Q96B54 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZNF428Q96B54 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 AP006587.1-201ENST00000534129 1502 ntBASIC25.27■■□□□ 1.64
ZNF428Q96B54 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 TREX1-205ENST00000625293 1783 ntBASIC25.27■■□□□ 1.64
ZNF428Q96B54 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 AC133681.1-201ENST00000465482 601 ntBASIC25.27■■□□□ 1.64
ZNF428Q96B54 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZNF428Q96B54 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ZNF428Q96B54 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 AC233702.5-201ENST00000584107 538 ntBASIC25.26■■□□□ 1.63
ZNF428Q96B54 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 AC113410.3-201ENST00000623366 203 ntBASIC25.26■■□□□ 1.63
ZNF428Q96B54 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZNF428Q96B54 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.26■■□□□ 1.63
ZNF428Q96B54 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 PRKY-204ENST00000533551 1019 ntBASIC25.25■■□□□ 1.63
ZNF428Q96B54 AL049637.2-201ENST00000641778 930 ntBASIC25.25■■□□□ 1.63
ZNF428Q96B54 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF428Q96B54 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF428Q96B54 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZNF428Q96B54 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC25.25■■□□□ 1.63
ZNF428Q96B54 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.24■■□□□ 1.63
ZNF428Q96B54 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.24■■□□□ 1.63
ZNF428Q96B54 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZNF428Q96B54 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
ZNF428Q96B54 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC25.23■■□□□ 1.63
ZNF428Q96B54 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ZNF428Q96B54 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.23■■□□□ 1.63
ZNF428Q96B54 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZNF428Q96B54 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.23■■□□□ 1.63
ZNF428Q96B54 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms