Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM54Q969K7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM54Q969K7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM54Q969K7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM54Q969K7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 AC233263.1-201ENST00000578059 224 ntBASIC17.31■□□□□ 0.36
TMEM54Q969K7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.31■□□□□ 0.36
TMEM54Q969K7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM54Q969K7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM54Q969K7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 KRT18P16-201ENST00000510337 1294 ntBASIC17.3■□□□□ 0.36
TMEM54Q969K7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 MIR4651-201ENST00000582622 73 ntBASIC17.3■□□□□ 0.36
TMEM54Q969K7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM54Q969K7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM54Q969K7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM54Q969K7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM54Q969K7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 KRT8P8-201ENST00000434750 1448 ntBASIC17.28■□□□□ 0.36
TMEM54Q969K7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM54Q969K7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM54Q969K7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms