Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 MMP23A-201ENST00000234610 1017 ntBASIC20.55■□□□□ 0.88
USP13Q92995 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.55■□□□□ 0.88
USP13Q92995 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.55■□□□□ 0.88
USP13Q92995 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.55■□□□□ 0.88
USP13Q92995 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.55■□□□□ 0.88
USP13Q92995 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.55■□□□□ 0.88
USP13Q92995 REXO1L10P-201ENST00000615707 1290 ntBASIC20.55■□□□□ 0.88
USP13Q92995 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.55■□□□□ 0.88
USP13Q92995 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 MIR1224-201ENST00000408193 85 ntBASIC20.54■□□□□ 0.88
USP13Q92995 NIFKP9-201ENST00000419265 221 ntBASIC20.54■□□□□ 0.88
USP13Q92995 RBM17P1-201ENST00000453646 1190 ntBASIC20.54■□□□□ 0.88
USP13Q92995 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.54■□□□□ 0.88
USP13Q92995 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
USP13Q92995 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.54■□□□□ 0.88
USP13Q92995 CR392000.1-201ENST00000624770 1228 ntBASIC20.54■□□□□ 0.88
USP13Q92995 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
USP13Q92995 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
USP13Q92995 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
USP13Q92995 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.54■□□□□ 0.88
USP13Q92995 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP13Q92995 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 AP006587.1-201ENST00000534129 1502 ntBASIC20.53■□□□□ 0.88
USP13Q92995 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.53■□□□□ 0.88
USP13Q92995 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 KSR1P1-201ENST00000446298 240 ntBASIC20.53■□□□□ 0.88
USP13Q92995 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.53■□□□□ 0.88
USP13Q92995 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
USP13Q92995 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 AC116351.2-201ENST00000606540 1585 ntBASIC20.53■□□□□ 0.88
USP13Q92995 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.53■□□□□ 0.88
USP13Q92995 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.53■□□□□ 0.88
USP13Q92995 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP13Q92995 KRT16P6-202ENST00000425692 1426 ntBASIC20.53■□□□□ 0.88
USP13Q92995 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
USP13Q92995 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP13Q92995 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP13Q92995 AC079598.2-202ENST00000546624 1451 ntBASIC20.52■□□□□ 0.88
USP13Q92995 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USP13Q92995 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP13Q92995 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP13Q92995 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP13Q92995 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.52■□□□□ 0.88
USP13Q92995 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
USP13Q92995 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP13Q92995 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 TFP1-202ENST00000475455 1573 ntBASIC20.51■□□□□ 0.87
USP13Q92995 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.51■□□□□ 0.87
USP13Q92995 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.51■□□□□ 0.87
USP13Q92995 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.51■□□□□ 0.87
USP13Q92995 AP000525.1-201ENST00000608286 694 ntBASIC20.51■□□□□ 0.87
USP13Q92995 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.51■□□□□ 0.87
USP13Q92995 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.51■□□□□ 0.87
USP13Q92995 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP13Q92995 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
USP13Q92995 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP13Q92995 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
USP13Q92995 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
USP13Q92995 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.5■□□□□ 0.87
USP13Q92995 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP13Q92995 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP13Q92995 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP13Q92995 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.5■□□□□ 0.87
USP13Q92995 RCN1P1-201ENST00000400413 996 ntBASIC20.5■□□□□ 0.87
USP13Q92995 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms