Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.3■■□□□ 1.16
USP6NLQ92738 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6NLQ92738 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6NLQ92738 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6NLQ92738 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.3■■□□□ 1.16
USP6NLQ92738 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6NLQ92738 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
USP6NLQ92738 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6NLQ92738 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 COX11P1-201ENST00000489116 835 ntBASIC22.29■■□□□ 1.16
USP6NLQ92738 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
USP6NLQ92738 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.29■■□□□ 1.16
USP6NLQ92738 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.29■■□□□ 1.16
USP6NLQ92738 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6NLQ92738 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.29■■□□□ 1.16
USP6NLQ92738 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6NLQ92738 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
USP6NLQ92738 AP000550.4-202ENST00000639755 178 ntBASIC22.29■■□□□ 1.16
USP6NLQ92738 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
USP6NLQ92738 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.28■■□□□ 1.16
USP6NLQ92738 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.28■■□□□ 1.16
USP6NLQ92738 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.28■■□□□ 1.16
USP6NLQ92738 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
USP6NLQ92738 AC009947.2-201ENST00000444014 672 ntBASIC22.28■■□□□ 1.16
USP6NLQ92738 Z85996.1-201ENST00000494644 937 ntBASIC22.28■■□□□ 1.16
USP6NLQ92738 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.28■■□□□ 1.16
USP6NLQ92738 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
USP6NLQ92738 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.28■■□□□ 1.16
USP6NLQ92738 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.28■■□□□ 1.16
USP6NLQ92738 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
USP6NLQ92738 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6NLQ92738 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.28■■□□□ 1.16
USP6NLQ92738 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6NLQ92738 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6NLQ92738 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6NLQ92738 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.27■■□□□ 1.16
USP6NLQ92738 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.27■■□□□ 1.16
USP6NLQ92738 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.27■■□□□ 1.16
USP6NLQ92738 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USP6NLQ92738 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.27■■□□□ 1.16
USP6NLQ92738 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6NLQ92738 FP700111.2-201ENST00000619190 1892 ntBASIC22.27■■□□□ 1.16
USP6NLQ92738 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.27■■□□□ 1.16
USP6NLQ92738 AC011558.1-201ENST00000623459 338 ntBASIC22.27■■□□□ 1.16
USP6NLQ92738 AC141257.4-201ENST00000634557 245 ntBASIC22.27■■□□□ 1.16
USP6NLQ92738 AC136944.6-201ENST00000634818 245 ntBASIC22.27■■□□□ 1.16
USP6NLQ92738 PHGDH-210ENST00000641115 1638 ntBASIC22.27■■□□□ 1.16
USP6NLQ92738 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
USP6NLQ92738 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
USP6NLQ92738 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP6NLQ92738 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USP6NLQ92738 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USP6NLQ92738 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.26■■□□□ 1.15
USP6NLQ92738 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.26■■□□□ 1.15
USP6NLQ92738 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.26■■□□□ 1.15
USP6NLQ92738 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
USP6NLQ92738 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USP6NLQ92738 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
USP6NLQ92738 KRT18P56-201ENST00000507275 550 ntBASIC22.26■■□□□ 1.15
USP6NLQ92738 FAM86EP-206ENST00000510506 987 ntBASIC22.26■■□□□ 1.15
USP6NLQ92738 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.26■■□□□ 1.15
USP6NLQ92738 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.26■■□□□ 1.15
USP6NLQ92738 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.26■■□□□ 1.15
USP6NLQ92738 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.26■■□□□ 1.15
USP6NLQ92738 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
USP6NLQ92738 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
USP6NLQ92738 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP6NLQ92738 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.25■■□□□ 1.15
USP6NLQ92738 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
USP6NLQ92738 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP6NLQ92738 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
USP6NLQ92738 KRT126P-201ENST00000549467 1181 ntBASIC22.25■■□□□ 1.15
USP6NLQ92738 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.25■■□□□ 1.15
USP6NLQ92738 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
USP6NLQ92738 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.25■■□□□ 1.15
USP6NLQ92738 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
USP6NLQ92738 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP6NLQ92738 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP6NLQ92738 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP6NLQ92738 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.24■■□□□ 1.15
USP6NLQ92738 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms