Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
TM9SF4Q92544 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TM9SF4Q92544 AC113410.3-201ENST00000623366 203 ntBASIC18.52■□□□□ 0.56
TM9SF4Q92544 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TM9SF4Q92544 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TM9SF4Q92544 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM9SF4Q92544 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TM9SF4Q92544 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF4Q92544 AL121906.2-201ENST00000621597 723 ntBASIC18.51■□□□□ 0.55
TM9SF4Q92544 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF4Q92544 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF4Q92544 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TM9SF4Q92544 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 MIR1224-201ENST00000408193 85 ntBASIC18.49■□□□□ 0.55
TM9SF4Q92544 KRT16P5-201ENST00000455284 522 ntBASIC18.49■□□□□ 0.55
TM9SF4Q92544 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AC099778.1-201ENST00000568593 1911 ntBASIC18.49■□□□□ 0.55
TM9SF4Q92544 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF4Q92544 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF4Q92544 AC087289.5-201ENST00000586076 3175 ntBASIC18.48■□□□□ 0.55
TM9SF4Q92544 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF4Q92544 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF4Q92544 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms