Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 AC107956.1-201ENST00000494359 873 ntBASIC17.82■□□□□ 0.44
RNF138Q8WVD3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 AC008550.1-201ENST00000511500 884 ntBASIC17.82■□□□□ 0.44
RNF138Q8WVD3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 AF186192.3-201ENST00000583427 947 ntBASIC17.82■□□□□ 0.44
RNF138Q8WVD3 Z99916.2-201ENST00000604037 246 ntBASIC17.82■□□□□ 0.44
RNF138Q8WVD3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF138Q8WVD3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 AL445675.2-201ENST00000620291 557 ntBASIC17.81■□□□□ 0.44
RNF138Q8WVD3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 HLA-A-209ENST00000638375 975 ntBASIC17.81■□□□□ 0.44
RNF138Q8WVD3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF138Q8WVD3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF138Q8WVD3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 KSR1P1-201ENST00000446298 240 ntBASIC17.79■□□□□ 0.44
RNF138Q8WVD3 AC066615.1-201ENST00000640911 628 ntBASIC17.79■□□□□ 0.44
RNF138Q8WVD3 AP006294.2-201ENST00000641667 209 ntBASIC17.79■□□□□ 0.44
RNF138Q8WVD3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF138Q8WVD3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF138Q8WVD3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms