Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 VENTXP5-201ENST00000523979 775 ntBASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 AC140113.3-201ENST00000605663 199 ntBASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 AL031432.5-201ENST00000641059 760 ntBASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3TC2Q8TF17 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 AC004951.3-201ENST00000418645 1148 ntBASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3TC2Q8TF17 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 TSPY21P-201ENST00000433481 731 ntBASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 PVRIG2P-201ENST00000435460 978 ntBASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 TSPY23P-201ENST00000440136 739 ntBASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SH3TC2Q8TF17 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 PRSS44-201ENST00000515154 1146 ntBASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 SLC25A24-204ENST00000569674 2357 ntBASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3TC2Q8TF17 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SH3TC2Q8TF17 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SH3TC2Q8TF17 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
SH3TC2Q8TF17 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 TUBB8P6-201ENST00000436895 1288 ntBASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 KRT18P16-201ENST00000510337 1294 ntBASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3TC2Q8TF17 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3TC2Q8TF17 YBX1P10-201ENST00000444752 975 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms