Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 AL136038.3-201ENST00000561909 1096 ntBASIC23.36■■□□□ 1.33
TRPM4Q8TD43 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 AC083849.1-201ENST00000615227 514 ntBASIC23.36■■□□□ 1.33
TRPM4Q8TD43 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 AL512604.3-201ENST00000569583 964 ntBASIC23.35■■□□□ 1.33
TRPM4Q8TD43 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.35■■□□□ 1.33
TRPM4Q8TD43 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.35■■□□□ 1.33
TRPM4Q8TD43 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 KRT8P45-201ENST00000414328 1447 ntBASIC23.34■■□□□ 1.33
TRPM4Q8TD43 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AP003041.3-201ENST00000527151 707 ntBASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 AL691432.3-201ENST00000621860 400 ntBASIC23.34■■□□□ 1.33
TRPM4Q8TD43 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRPM4Q8TD43 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TRPM4Q8TD43 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRPM4Q8TD43 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRPM4Q8TD43 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRPM4Q8TD43 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRPM4Q8TD43 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TRPM4Q8TD43 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 TSPY21P-201ENST00000433481 731 ntBASIC23.32■■□□□ 1.32
TRPM4Q8TD43 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 TSPY23P-201ENST00000440136 739 ntBASIC23.32■■□□□ 1.32
TRPM4Q8TD43 AC112907.2-201ENST00000448639 330 ntBASIC23.32■■□□□ 1.32
TRPM4Q8TD43 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 HYMAI.1-201ENST00000620949 238 ntBASIC23.32■■□□□ 1.32
TRPM4Q8TD43 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 TMEM179-206ENST00000616017 1645 ntBASIC23.32■■□□□ 1.32
TRPM4Q8TD43 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TRPM4Q8TD43 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRPM4Q8TD43 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRPM4Q8TD43 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRPM4Q8TD43 AC246785.2-201ENST00000432512 513 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms