Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD2Q7Z408 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CSMD2Q7Z408 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AC106795.1-205ENST00000512851 1056 ntBASIC16.63■□□□□ 0.25
CSMD2Q7Z408 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AL031432.5-201ENST00000641059 760 ntBASIC16.63■□□□□ 0.25
CSMD2Q7Z408 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AC092183.1-201ENST00000469884 875 ntBASIC16.63■□□□□ 0.25
CSMD2Q7Z408 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CSMD2Q7Z408 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AP002469.2-201ENST00000531724 424 ntBASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 MIR3652-201ENST00000579335 131 ntBASIC16.62■□□□□ 0.25
CSMD2Q7Z408 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD2Q7Z408 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 TSPY17P-201ENST00000450329 467 ntBASIC16.61■□□□□ 0.25
CSMD2Q7Z408 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 SLC25A6P4-201ENST00000586535 553 ntBASIC16.61■□□□□ 0.25
CSMD2Q7Z408 AL023973.1-201ENST00000624619 620 ntBASIC16.61■□□□□ 0.25
CSMD2Q7Z408 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.61■□□□□ 0.25
CSMD2Q7Z408 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD2Q7Z408 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 GCSHP2-201ENST00000560971 527 ntBASIC16.6■□□□□ 0.25
CSMD2Q7Z408 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 Z85996.1-201ENST00000494644 937 ntBASIC16.6■□□□□ 0.25
CSMD2Q7Z408 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 KRT8P20-201ENST00000423953 1409 ntBASIC16.6■□□□□ 0.25
CSMD2Q7Z408 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 AC112907.2-201ENST00000448639 330 ntBASIC16.6■□□□□ 0.25
CSMD2Q7Z408 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD2Q7Z408 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD2Q7Z408 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms