Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AL512408.1-201ENST00000569378 2000 ntBASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 MIR1238-201ENST00000408483 83 ntBASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 AC004980.1-204ENST00000429707 299 ntBASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 AL162377.1-201ENST00000618844 1793 ntBASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
DCLRE1AQ6PJP8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 FITM1-202ENST00000559294 800 ntBASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 MIR6786-201ENST00000616843 113 ntBASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 GABARAPL3-202ENST00000624044 1851 ntBASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DCLRE1AQ6PJP8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 MESTP1-201ENST00000404287 994 ntBASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 AL445228.2-201ENST00000605589 952 ntBASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DCLRE1AQ6PJP8 KRT8P8-201ENST00000434750 1448 ntBASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TMPOP1-202ENST00000424642 1267 ntBASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 HLA-A-209ENST00000638375 975 ntBASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DCLRE1AQ6PJP8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DCLRE1AQ6PJP8 KRT8P9-201ENST00000558927 1449 ntBASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms