Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.77■□□□□ 0.6
PPP4R4Q6NUP7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP4R4Q6NUP7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP4R4Q6NUP7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R4Q6NUP7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.77■□□□□ 0.59
PPP4R4Q6NUP7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
PPP4R4Q6NUP7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PPP4R4Q6NUP7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PPP4R4Q6NUP7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 MIR663A-201ENST00000385250 93 ntBASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AC007322.1-201ENST00000426983 750 ntBASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 AC010536.3-201ENST00000620306 533 ntBASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP4R4Q6NUP7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 CDCA4P2-201ENST00000441182 718 ntBASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R4Q6NUP7 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R4Q6NUP7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 BX119927.1-201ENST00000636596 1552 ntBASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 AC231657.2-201ENST00000624556 255 ntBASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP4R4Q6NUP7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms