Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCRAQ6ISU1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCRAQ6ISU1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCRAQ6ISU1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCRAQ6ISU1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 GCSHP2-201ENST00000560971 527 ntBASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCRAQ6ISU1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 AC009078.2-202ENST00000463353 338 ntBASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCRAQ6ISU1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCRAQ6ISU1 KRT16P6-202ENST00000425692 1426 ntBASIC20.27■□□□□ 0.83
PTCRAQ6ISU1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.27■□□□□ 0.83
PTCRAQ6ISU1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCRAQ6ISU1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms