Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ANKRD55Q3KP44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ANKRD55Q3KP44 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.27■□□□□ 0.19
ANKRD55Q3KP44 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.27■□□□□ 0.19
ANKRD55Q3KP44 PTBP1P-201ENST00000554374 1601 ntBASIC16.27■□□□□ 0.19
ANKRD55Q3KP44 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AL390961.4-201ENST00000623958 2535 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AL161938.1-201ENST00000569833 2180 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AC027612.3-201ENST00000413684 1047 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L2-201ENST00000561772 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AC243732.1-201ENST00000612648 864 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L6-201ENST00000626483 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L1-201ENST00000627662 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L8-201ENST00000629013 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L3-201ENST00000630187 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L7-201ENST00000630678 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 DUX4L5-201ENST00000630834 1275 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 RBM17P2-201ENST00000616397 1405 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 AP001271.2-201ENST00000624018 1556 ntBASIC16.26■□□□□ 0.19
ANKRD55Q3KP44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AC079598.2-202ENST00000546624 1451 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AC123595.1-201ENST00000440769 1046 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 MIR5787-201ENST00000611784 55 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AL356652.1-201ENST00000615962 565 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AC006333.2-201ENST00000607957 2099 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 AC135050.7-201ENST00000624508 2218 ntBASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
ANKRD55Q3KP44 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 YBX1P1-201ENST00000445822 960 ntBASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.24■□□□□ 0.19
ANKRD55Q3KP44 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms