Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SHROOM1Q2M3G4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 AC104076.2-201ENST00000448912 469 ntBASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 AC097488.1-201ENST00000507834 756 ntBASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 FEM1AP1-201ENST00000431297 1995 ntBASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 KRT18P22-201ENST00000402024 1347 ntBASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SHROOM1Q2M3G4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 AC130371.2-201ENST00000619443 611 ntBASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 AC131212.4-201ENST00000623606 975 ntBASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SHROOM1Q2M3G4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 Z85996.1-201ENST00000494644 937 ntBASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 AL049597.2-201ENST00000565575 961 ntBASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 AP005242.2-201ENST00000580065 1175 ntBASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 AC011298.2-201ENST00000617989 482 ntBASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SHROOM1Q2M3G4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SHROOM1Q2M3G4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 AL137013.1-201ENST00000432946 1228 ntBASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 SLC25A1P4-201ENST00000567977 778 ntBASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 FAM87A-204ENST00000613235 858 ntBASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 AC006011.2-201ENST00000621313 1158 ntBASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SHROOM1Q2M3G4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms