Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDR2Q01850 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.92■□□□□ 0.94
CDR2Q01850 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDR2Q01850 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
CDR2Q01850 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CDR2Q01850 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR2Q01850 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.92■□□□□ 0.94
CDR2Q01850 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.91■□□□□ 0.94
CDR2Q01850 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDR2Q01850 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDR2Q01850 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.91■□□□□ 0.94
CDR2Q01850 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CDR2Q01850 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR2Q01850 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CDR2Q01850 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDR2Q01850 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CDR2Q01850 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDR2Q01850 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR2Q01850 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDR2Q01850 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.9■□□□□ 0.94
CDR2Q01850 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDR2Q01850 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR2Q01850 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.9■□□□□ 0.94
CDR2Q01850 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR2Q01850 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR2Q01850 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.9■□□□□ 0.94
CDR2Q01850 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR2Q01850 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR2Q01850 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.89■□□□□ 0.94
CDR2Q01850 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.89■□□□□ 0.94
CDR2Q01850 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.89■□□□□ 0.94
CDR2Q01850 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDR2Q01850 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDR2Q01850 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDR2Q01850 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.89■□□□□ 0.93
CDR2Q01850 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.89■□□□□ 0.93
CDR2Q01850 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.89■□□□□ 0.93
CDR2Q01850 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR2Q01850 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.89■□□□□ 0.93
CDR2Q01850 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR2Q01850 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR2Q01850 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
CDR2Q01850 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CDR2Q01850 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
CDR2Q01850 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR2Q01850 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.89■□□□□ 0.93
CDR2Q01850 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR2Q01850 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 Z82202.1-201ENST00000623446 1880 ntBASIC20.88■□□□□ 0.93
CDR2Q01850 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.88■□□□□ 0.93
CDR2Q01850 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR2Q01850 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDR2Q01850 HLA-L-209ENST00000420110 1011 ntBASIC20.88■□□□□ 0.93
CDR2Q01850 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.88■□□□□ 0.93
CDR2Q01850 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.88■□□□□ 0.93
CDR2Q01850 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.88■□□□□ 0.93
CDR2Q01850 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.88■□□□□ 0.93
CDR2Q01850 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms